SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/60564
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2041 A_BomaASG_c13069_g1_i1
203bp
regulatory-associated_protein_of_TOR_[Bombyx_mori]
FPKM:4.63 TPM:3.62
2042 A_BomaASG_c13069_g1_i2
330bp
regulatory-associated_protein_of_TOR_[Bombyx_mori]
FPKM:3.89 TPM:3.04
2043 A_BomaASG_c1306_g1_i1
238bp
PREDICTED:_uncharacterized_protein_LOC105387240_[Plutella_xylostella]
FPKM:0.64 TPM:0.50
2044 A_BomaASG_c1306_g1_i2
208bp
PR_domain_zinc_finger_protein_4_[Trachymyrmex_zeteki]
FPKM:3.80 TPM:2.98
2045 A_BomaASG_c13070_g1_i1
404bp
FPKM:2.19 TPM:1.71
2046 A_BomaASG_c13073_g1_i1
213bp
FPKM:2.65 TPM:2.07
2047 A_BomaASG_c13074_g1_i1
830bp
uncharacterized_protein_LOC110386615_[Bombyx_mori]
FPKM:1.62 TPM:1.26
2048 A_BomaASG_c13075_g1_i1
1032bp
FPKM:3.79 TPM:2.97
2049 A_BomaASG_c13076_g1_i1
271bp
FPKM:41.01 TPM:32.09
2050 A_BomaASG_c13077_g1_i1
392bp
FPKM:2.30 TPM:1.80
2051 A_BomaASG_c13078_g1_i1
202bp
FPKM:2.10 TPM:1.64
2052 A_BomaASG_c1307_g1_i1
201bp
PREDICTED:_monocarboxylate_transporter_4-like_[Amyelois_transitella]
FPKM:2.13 TPM:1.67
2053 A_BomaASG_c13080_g1_i1
371bp
ATP-binding_cassette_sub-family_C_member_Sur_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0005524 F ATP binding
GO:0006031 P chitin biosynthetic process
GO:0006810 P transport
GO:0007507 P heart development
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:5.80 TPM:4.54
2054 A_BomaASG_c13081_g1_i1
341bp
FPKM:5.56 TPM:4.35
2055 A_BomaASG_c13083_g1_i1
1374bp
vacuolar_protein_sorting-associated_protein_72_homolog_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0010629 P negative regulation of gene expression
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043486 P histone exchange
FPKM:16.43 TPM:12.85
2056 A_BomaASG_c13085_g1_i1
383bp
FPKM:1.43 TPM:1.12
2057 A_BomaASG_c13087_g1_i1
335bp
protein_O-GlcNAcase_[Bombyx_mori]
GO:0004402 F histone acetyltransferase activity
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006044 P N-acetylglucosamine metabolic process
GO:0006612 P protein targeting to membrane
GO:0007568 P aging
GO:0008152 P metabolic process
GO:0010524 P positive regulation of calcium ion transport into cytosol
GO:0010616 P negative regulation of cardiac muscle adaptation
GO:0016231 F beta-N-acetylglucosaminidase activity
GO:0016573 P histone acetylation
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0031343 P positive regulation of cell killing
GO:0032024 P positive regulation of insulin secretion
GO:0043243 P positive regulation of protein-containing complex disassembly
GO:0045862 P positive regulation of proteolysis
GO:0046060 P dATP metabolic process
GO:0046326 P positive regulation of glucose import
GO:0048545 P response to steroid hormone
GO:0051054 P positive regulation of DNA metabolic process
GO:0051901 P positive regulation of mitochondrial depolarization
GO:0051928 P positive regulation of calcium ion transport
GO:0060051 P negative regulation of protein glycosylation
GO:0060124 P positive regulation of growth hormone secretion
GO:0070265 P necrotic cell death
FPKM:2.83 TPM:2.22
2058 A_BomaASG_c13087_g1_i2
446bp
protein_O-GlcNAcase_[Bombyx_mori]
GO:0004402 F histone acetyltransferase activity
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006044 P N-acetylglucosamine metabolic process
GO:0006612 P protein targeting to membrane
GO:0007568 P aging
GO:0008152 P metabolic process
GO:0010524 P positive regulation of calcium ion transport into cytosol
GO:0010616 P negative regulation of cardiac muscle adaptation
GO:0016231 F beta-N-acetylglucosaminidase activity
GO:0016573 P histone acetylation
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0031343 P positive regulation of cell killing
GO:0032024 P positive regulation of insulin secretion
GO:0043243 P positive regulation of protein-containing complex disassembly
GO:0045862 P positive regulation of proteolysis
GO:0046060 P dATP metabolic process
GO:0046326 P positive regulation of glucose import
GO:0048545 P response to steroid hormone
GO:0051054 P positive regulation of DNA metabolic process
GO:0051901 P positive regulation of mitochondrial depolarization
GO:0051928 P positive regulation of calcium ion transport
GO:0060051 P negative regulation of protein glycosylation
GO:0060124 P positive regulation of growth hormone secretion
GO:0070265 P necrotic cell death
FPKM:5.17 TPM:4.05
2059 A_BomaASG_c13088_g1_i1
708bp
FPKM:3.45 TPM:2.70
2060 A_BomaASG_c13089_g1_i1
790bp
LOW_QUALITY_PROTEIN:_latrophilin_Cirl_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007269 P neurotransmitter secretion
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0016524 F latrotoxin receptor activity
GO:0030246 F carbohydrate binding
FPKM:1.89 TPM:1.48
2061 A_BomaASG_c1308_g1_i1
406bp
FPKM:4.77 TPM:3.73
2062 A_BomaASG_c13091_g1_i1
277bp
FPKM:9.76 TPM:7.64
2063 A_BomaASG_c13092_g1_i1
665bp
FPKM:1.92 TPM:1.51
2064 A_BomaASG_c13094_g1_i1
540bp
uncharacterized_protein_LOC101736443_[Bombyx_mori]
FPKM:3.96 TPM:3.10
2065 A_BomaASG_c13095_g1_i1
258bp
Uncharacterized_protein_OBRU01_10026_[Operophtera_brumata]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:3.14 TPM:2.45
2066 A_BomaASG_c1309_g1_i1
471bp
FPKM:0.00 TPM:0.00
2067 A_BomaASG_c1309_g1_i2
542bp
FPKM:2.96 TPM:2.31
2068 A_BomaASG_c130_g1_i1
940bp
glutathione_peroxidase_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0004602 F glutathione peroxidase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006979 P response to oxidative stress
GO:0007275 P multicellular organism development
GO:0016491 F oxidoreductase activity
GO:0047066 F phospholipid-hydroperoxide glutathione peroxidase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
FPKM:178.03 TPM:139.30
2069 A_BomaASG_c13101_g1_i1
303bp
FPKM:2.94 TPM:2.30
2070 A_BomaASG_c13103_g1_i1
362bp
FPKM:1.05 TPM:0.82
previous next from show/60564

- SilkBase 1999-2023 -