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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
181 A_BomaASG_c10254_g1_i1
505bp
FPKM:22.27 TPM:17.42
182 A_BomaASG_c10255_g1_i1
242bp
FPKM:4.29 TPM:3.36
183 A_BomaASG_c10256_g1_i1
328bp
FPKM:0.63 TPM:0.49
184 A_BomaASG_c10257_g1_i1
404bp
FPKM:2.62 TPM:2.05
185 A_BomaASG_c10258_g1_i1
801bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.28 TPM:1.78
186 A_BomaASG_c10259_g1_i1
242bp
FPKM:1.84 TPM:1.44
187 A_BomaASG_c1025_g1_i1
731bp
PHD_finger_protein_rhinoceros_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0042051 P compound eye photoreceptor development
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0046872 F metal ion binding
FPKM:2.65 TPM:2.07
188 A_BomaASG_c10260_g1_i1
239bp
FPKM:1.27 TPM:0.99
189 A_BomaASG_c10262_g1_i1
329bp
FPKM:0.31 TPM:0.24
190 A_BomaASG_c10265_g1_i1
318bp
FPKM:3.33 TPM:2.61
191 A_BomaASG_c10267_g1_i1
228bp
FPKM:1.44 TPM:1.13
192 A_BomaASG_c10268_g1_i1
285bp
FPKM:3.34 TPM:2.61
193 A_BomaASG_c10269_g1_i1
357bp
FPKM:1.08 TPM:0.84
194 A_BomaASG_c1026_g1_i1
246bp
FPKM:1.18 TPM:0.92
195 A_BomaASG_c10270_g1_i1
235bp
FPKM:1.99 TPM:1.56
196 A_BomaASG_c10275_g1_i1
259bp
FPKM:4.14 TPM:3.24
197 A_BomaASG_c10277_g1_i1
338bp
FPKM:2.08 TPM:1.63
198 A_BomaASG_c10278_g1_i1
566bp
FPKM:2.25 TPM:1.76
199 A_BomaASG_c1027_g1_i1
455bp
PREDICTED:_uncharacterized_protein_LOC106138885,_partial_[Amyelois_transitella]
FPKM:1.45 TPM:1.14
200 A_BomaASG_c10280_g1_i1
250bp
FPKM:9.03 TPM:7.07
201 A_BomaASG_c10281_g1_i1
386bp
alpha-(1,3)-fucosyltransferase_7-like_[Bombyx_mori]
FPKM:1.18 TPM:0.92
202 A_BomaASG_c10282_g1_i1
226bp
disks_large_homolog_5_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0006461 P protein-containing complex assembly
GO:0007165 P signal transduction
GO:0008013 F beta-catenin binding
GO:0008092 F cytoskeletal protein binding
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0030159 F signaling receptor complex adaptor activity
GO:0030859 P polarized epithelial cell differentiation
GO:0030901 P midbrain development
GO:0035556 P intracellular signal transduction
GO:0042981 P regulation of apoptotic process
GO:0045176 P apical protein localization
GO:0045186 P zonula adherens assembly
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0060441 P epithelial tube branching involved in lung morphogenesis
GO:0071896 P protein localization to adherens junction
GO:0072205 P metanephric collecting duct development
FPKM:2.22 TPM:1.73
203 A_BomaASG_c10285_g1_i1
290bp
FPKM:2.41 TPM:1.89
204 A_BomaASG_c10286_g1_i1
220bp
FPKM:10.39 TPM:8.13
205 A_BomaASG_c10288_g1_i1
251bp
FPKM:2.24 TPM:1.75
206 A_BomaASG_c10291_g1_i1
368bp
FPKM:1.53 TPM:1.20
207 A_BomaASG_c10293_g1_i1
309bp
FPKM:2.12 TPM:1.66
208 A_BomaASG_c10294_g1_i1
587bp
autophagy-related_protein_16-1_isoform_X2_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000421 C autophagosome membrane
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0034045 C phagophore assembly site membrane
GO:0039689 P negative stranded viral RNA replication
FPKM:1.26 TPM:0.99
209 A_BomaASG_c10295_g1_i1
356bp
5'-3'_exoribonuclease_1_[Bombyx_mori]
GO:0000723 P telomere maintenance
GO:0000932 C P-body
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004534 F 5'-3' exoribonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006396 P RNA processing
GO:0007126 P meiotic cell cycle
GO:0007569 P cell aging
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0071028 P nuclear mRNA surveillance
GO:0071044 P histone mRNA catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
FPKM:4.87 TPM:3.81
210 A_BomaASG_c10297_g1_i1
215bp
centromere_protein_I_[Bombyx_mori]
FPKM:3.43 TPM:2.68
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