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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1801 A_BomaASG_c12766_g1_i1
283bp
FPKM:3.57 TPM:2.79
1802 A_BomaASG_c12766_g1_i2
238bp
FPKM:0.36 TPM:0.28
1803 A_BomaASG_c12767_g1_i1
228bp
FPKM:12.25 TPM:9.59
1804 A_BomaASG_c12768_g1_i1
668bp
FPKM:3.72 TPM:2.91
1805 A_BomaASG_c1276_g1_i1
248bp
FPKM:3.46 TPM:2.70
1806 A_BomaASG_c12770_g1_i1
337bp
putative_ATP-dependent_RNA_helicase_DHX30_[Bombyx_mori]
FPKM:3.29 TPM:2.57
1807 A_BomaASG_c12771_g1_i1
298bp
ribosomal_protein_S26_[Bombyx_mori]
GO:0003729 F mRNA binding
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0022627 C cytosolic small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
FPKM:3.80 TPM:2.97
1808 A_BomaASG_c12772_g1_i1
543bp
FPKM:4.64 TPM:3.63
1809 A_BomaASG_c12773_g1_i1
408bp
polyamine-modulated_factor_1-binding_protein_1_isoform_X2_[Bombyx_mori]
FPKM:0.59 TPM:0.46
1810 A_BomaASG_c12773_g1_i2
596bp
polyamine-modulated_factor_1-binding_protein_1_isoform_X2_[Bombyx_mori]
FPKM:0.59 TPM:0.46
1811 A_BomaASG_c12773_g1_i3
396bp
polyamine-modulated_factor_1-binding_protein_1_isoform_X2_[Bombyx_mori]
FPKM:1.01 TPM:0.79
1812 A_BomaASG_c12774_g1_i1
368bp
FPKM:2.30 TPM:1.80
1813 A_BomaASG_c12775_g1_i1
234bp
FPKM:12.07 TPM:9.45
1814 A_BomaASG_c12776_g1_i1
296bp
FPKM:5.77 TPM:4.52
1815 A_BomaASG_c12778_g1_i1
215bp
FPKM:5.14 TPM:4.02
1816 A_BomaASG_c12779_g1_i1
520bp
FPKM:5.38 TPM:4.21
1817 A_BomaASG_c12780_g1_i1
302bp
uncharacterized_protein_LOC110384863_[Bombyx_mori]
FPKM:11.08 TPM:8.67
1818 A_BomaASG_c12781_g1_i1
210bp
FPKM:0.00 TPM:0.00
1819 A_BomaASG_c12782_g1_i1
393bp
serine/threonine-protein_kinase_SMG1_[Bombyx_mori]
FPKM:5.03 TPM:3.94
1820 A_BomaASG_c12784_g1_i1
276bp
reverse_transcriptase_[Bombyx_mori]
FPKM:5.81 TPM:4.55
1821 A_BomaASG_c12785_g1_i1
244bp
FPKM:3.60 TPM:2.82
1822 A_BomaASG_c12786_g1_i1
353bp
FPKM:0.55 TPM:0.43
1823 A_BomaASG_c12786_g1_i2
600bp
FPKM:3.06 TPM:2.40
1824 A_BomaASG_c12788_g1_i1
515bp
inter-alpha-trypsin_inhibitor_heavy_chain_H4_isoform_X4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0008150 P biological_process
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030212 P hyaluronan metabolic process
GO:0030414 F peptidase inhibitor activity
FPKM:2.42 TPM:1.90
1825 A_BomaASG_c12789_g1_i1
446bp
protein_shuttle_craft_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0016874 F ligase activity
GO:0044822 F RNA binding
GO:0045347 P negative regulation of MHC class II biosynthetic process
GO:0046872 F metal ion binding
FPKM:3.37 TPM:2.64
1826 A_BomaASG_c12790_g1_i1
437bp
myosin_light_chain_alkali_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005859 C muscle myosin complex
GO:0016459 C myosin complex
FPKM:1.55 TPM:1.21
1827 A_BomaASG_c12792_g1_i1
1056bp
protein_twisted_gastrulation_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0007354 P zygotic determination of anterior/posterior axis, embryo
GO:0007362 P terminal region determination
GO:0008201 F heparin binding
GO:0008293 P torso signaling pathway
GO:0010629 P negative regulation of gene expression
GO:0017015 P regulation of transforming growth factor beta receptor signaling pathway
GO:0030510 P regulation of BMP signaling pathway
GO:0045165 P cell fate commitment
FPKM:43.22 TPM:33.82
1828 A_BomaASG_c12793_g1_i1
558bp
FPKM:2.16 TPM:1.69
1829 A_BomaASG_c12793_g1_i2
257bp
FPKM:0.00 TPM:0.00
1830 A_BomaASG_c12795_g1_i1
259bp
FPKM:3.62 TPM:2.84
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