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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1321 A_BomaASG_c12142_g1_i1
362bp
FPKM:1.82 TPM:1.42
1322 A_BomaASG_c12142_g1_i2
337bp
FPKM:0.62 TPM:0.49
1323 A_BomaASG_c12144_g1_i1
256bp
FPKM:4.79 TPM:3.75
1324 A_BomaASG_c12146_g1_i1
213bp
PREDICTED:_calcium_permeable_stress-gated_cation_channel_1-like_[Sinocyclocheilus_grahami]
FPKM:2.65 TPM:2.07
1325 A_BomaASG_c12147_g1_i1
350bp
FPKM:1.40 TPM:1.09
1326 A_BomaASG_c12148_g1_i1
298bp
FPKM:4.18 TPM:3.27
1327 A_BomaASG_c12149_g1_i1
275bp
FPKM:0.90 TPM:0.71
1328 A_BomaASG_c1214_g1_i1
297bp
hypothetical_protein_RR48_03773_[Papilio_machaon]
FPKM:1.15 TPM:0.90
1329 A_BomaASG_c12152_g1_i1
211bp
FPKM:0.00 TPM:0.00
1330 A_BomaASG_c12153_g1_i1
203bp
FPKM:0.00 TPM:0.00
1331 A_BomaASG_c12153_g1_i2
358bp
FPKM:1.61 TPM:1.26
1332 A_BomaASG_c12154_g1_i1
257bp
FPKM:1.06 TPM:0.83
1333 A_BomaASG_c12155_g1_i1
202bp
sprT-like_domain-containing_protein_Spartan_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004478 F methionine adenosyltransferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006556 P S-adenosylmethionine biosynthetic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
GO:0016607 C nuclear speck
GO:0019985 P translesion synthesis
GO:0031398 P positive regulation of protein ubiquitination
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
FPKM:3.14 TPM:2.46
1334 A_BomaASG_c12156_g1_i1
876bp
uncharacterized_protein_LOC101742695_[Bombyx_mori]
FPKM:2.50 TPM:1.95
1335 A_BomaASG_c12157_g1_i1
224bp
FPKM:0.76 TPM:0.59
1336 A_BomaASG_c12158_g1_i1
357bp
FPKM:0.54 TPM:0.42
1337 A_BomaASG_c12163_g1_i1
557bp
decaprenyl-diphosphate_synthase_subunit_2_[Bombyx_mori]
GO:0000010 F trans-hexaprenyltranstransferase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006744 P ubiquinone biosynthetic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0046982 F protein heterodimerization activity
GO:0050347 F trans-octaprenyltranstransferase activity
GO:0050878 P regulation of body fluid levels
GO:0051290 P protein heterotetramerization
GO:1990234 C transferase complex
FPKM:1.90 TPM:1.49
1338 A_BomaASG_c12164_g1_i1
299bp
FPKM:2.26 TPM:1.77
1339 A_BomaASG_c12168_g1_i1
236bp
FPKM:2.62 TPM:2.05
1340 A_BomaASG_c12169_g1_i1
397bp
FPKM:4.28 TPM:3.35
1341 A_BomaASG_c1216_g1_i1
489bp
multidrug_resistance_protein_homolog_49_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001666 P response to hypoxia
GO:0005524 F ATP binding
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006855 P xenobiotic transmembrane transport
GO:0008152 P metabolic process
GO:0008354 P germ cell migration
GO:0008559 F ABC-type xenobiotic transporter activity
GO:0015238 F xenobiotic transmembrane transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031427 P response to methotrexate
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0042908 P xenobiotic transport
GO:0055085 P transmembrane transport
FPKM:1.64 TPM:1.28
1342 A_BomaASG_c12171_g1_i1
254bp
FPKM:1.63 TPM:1.27
1343 A_BomaASG_c12172_g1_i1
289bp
beta-secretase_1_[Bombyx_mori]
FPKM:1.62 TPM:1.27
1344 A_BomaASG_c12175_g1_i1
292bp
FPKM:1.19 TPM:0.93
1345 A_BomaASG_c12176_g1_i1
239bp
FPKM:5.70 TPM:4.46
1346 A_BomaASG_c12177_g1_i1
2045bp
26S_proteasome_non-ATPase_regulatory_subunit_11_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005515 F protein binding
GO:0005838 C proteasome regulatory particle
GO:0005875 C microtubule associated complex
GO:0008541 C proteasome regulatory particle, lid subcomplex
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
FPKM:29.34 TPM:22.96
1347 A_BomaASG_c12177_g1_i2
1959bp
26S_proteasome_non-ATPase_regulatory_subunit_11_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005515 F protein binding
GO:0005838 C proteasome regulatory particle
GO:0005875 C microtubule associated complex
GO:0008541 C proteasome regulatory particle, lid subcomplex
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
FPKM:110.17 TPM:86.20
1348 A_BomaASG_c12179_g1_i1
219bp
FPKM:2.43 TPM:1.90
1349 A_BomaASG_c12180_g1_i1
245bp
hypothetical_protein_RR46_10186_[Papilio_xuthus]
FPKM:2.97 TPM:2.32
1350 A_BomaASG_c12183_g1_i1
287bp
FPKM:7.39 TPM:5.78
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