SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

next from show/60564
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1 A_BomaASG_c10000_g1_i1
579bp
endoribonuclease_ZC3H12A_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:3.60 TPM:2.82
2 A_BomaASG_c10006_g1_i1
323bp
PREDICTED:_uncharacterized_protein_K02A2.6-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0046872 F metal ion binding
FPKM:2.27 TPM:1.77
3 A_BomaASG_c10007_g1_i1
312bp
FPKM:2.77 TPM:2.17
4 A_BomaASG_c10009_g1_i1
256bp
dynein_heavy_chain,_partial_[Cadra_cautella]
GO:0000166 F nucleotide binding
GO:0000776 C kinetochore
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007098 P centrosome cycle
GO:0007279 P pole cell formation
GO:0007282 P cystoblast division
GO:0007294 P germarium-derived oocyte fate determination
GO:0007298 P border follicle cell migration
GO:0007301 P female germline ring canal formation
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007349 P cellularization
GO:0007405 P neuroblast proliferation
GO:0008088 P axo-dendritic transport
GO:0008090 P retrograde axonal transport
GO:0008298 P intracellular mRNA localization
GO:0008569 F minus-end-directed microtubule motor activity
GO:0016319 P mushroom body development
GO:0016887 F ATP hydrolysis activity
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0030286 C dynein complex
GO:0030529 C ribonucleoprotein complex
GO:0030723 P ovarian fusome organization
GO:0034063 P stress granule assembly
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0040001 P establishment of mitotic spindle localization
GO:0040003 P chitin-based cuticle development
GO:0042623 F ATP hydrolysis activity
GO:0043005 C neuron projection
GO:0045169 C fusome
GO:0045172 C germline ring canal
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045478 P fusome organization
GO:0045505 F dynein intermediate chain binding
GO:0046604 P positive regulation of mitotic centrosome separation
GO:0047497 P mitochondrion transport along microtubule
GO:0048134 P germ-line cyst formation
GO:0048311 P mitochondrion distribution
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0050658 P RNA transport
GO:0051237 P maintenance of RNA location
GO:0051642 P centrosome localization
GO:0051683 P establishment of Golgi localization
GO:0051959 F dynein light intermediate chain binding
GO:1904115 C axon cytoplasm
GO:1904801 P positive regulation of neuron remodeling
FPKM:2.66 TPM:2.08
5 A_BomaASG_c1000_g1_i1
855bp
potassium_voltage-gated_channel_protein_Shaker_isoform_X7_[Bombyx_mori]
GO:0001508 P action potential
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005251 F delayed rectifier potassium channel activity
GO:0005267 F potassium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007611 P learning or memory
GO:0007619 P courtship behavior
GO:0007629 P flight behavior
GO:0007637 P proboscis extension reflex
GO:0008076 C voltage-gated potassium channel complex
GO:0008345 P larval locomotory behavior
GO:0009584 P detection of visible light
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022843 F voltage-gated cation channel activity
GO:0030431 P sleep
GO:0034765 P regulation of ion transmembrane transport
GO:0045187 P regulation of circadian sleep/wake cycle, sleep
GO:0048047 P mating behavior, sex discrimination
GO:0048150 P behavioral response to ether
GO:0048675 P axon extension
GO:0050909 P sensory perception of taste
GO:0051260 P protein homooligomerization
GO:0055085 P transmembrane transport
GO:0060025 P regulation of synaptic activity
GO:0071805 P potassium ion transmembrane transport
FPKM:1.64 TPM:1.28
6 A_BomaASG_c10010_g1_i1
418bp
PREDICTED:_FLYWCH-type_zinc_finger-containing_protein_1-like_[Plutella_xylostella]
FPKM:2.69 TPM:2.11
7 A_BomaASG_c10011_g1_i1
333bp
FPKM:4.89 TPM:3.83
8 A_BomaASG_c10012_g1_i1
386bp
FPKM:1.89 TPM:1.48
9 A_BomaASG_c10013_g1_i1
201bp
FPKM:3.20 TPM:2.50
10 A_BomaASG_c10014_g1_i1
269bp
FPKM:5.21 TPM:4.08
11 A_BomaASG_c10015_g1_i1
587bp
FPKM:5.68 TPM:4.44
12 A_BomaASG_c10017_g1_i1
235bp
FPKM:3.98 TPM:3.11
13 A_BomaASG_c10018_g1_i1
340bp
FPKM:2.35 TPM:1.84
14 A_BomaASG_c10019_g1_i1
486bp
FPKM:5.43 TPM:4.25
15 A_BomaASG_c1001_g1_i1
320bp
FPKM:0.99 TPM:0.77
16 A_BomaASG_c10021_g1_i1
326bp
FPKM:1.91 TPM:1.49
17 A_BomaASG_c10022_g1_i1
1282bp
electron_transfer_flavoprotein_subunit_alpha,_mitochondrial_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0022904 P respiratory electron transport chain
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
FPKM:35.87 TPM:28.07
18 A_BomaASG_c10024_g1_i1
429bp
FPKM:4.17 TPM:3.27
19 A_BomaASG_c10026_g1_i1
280bp
FPKM:1.30 TPM:1.02
20 A_BomaASG_c10027_g1_i1
244bp
FPKM:4.20 TPM:3.29
21 A_BomaASG_c10028_g1_i1
219bp
FPKM:1.62 TPM:1.27
22 A_BomaASG_c10029_g1_i1
441bp
FPKM:1.33 TPM:1.04
23 A_BomaASG_c1002_g1_i1
583bp
PREDICTED:_putative_nuclease_HARBI1_[Amyelois_transitella]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.04 TPM:1.59
24 A_BomaASG_c10033_g1_i1
744bp
FPKM:17.31 TPM:13.55
25 A_BomaASG_c10033_g1_i2
389bp
FPKM:0.00 TPM:0.00
26 A_BomaASG_c10034_g1_i1
311bp
FPKM:2.09 TPM:1.64
27 A_BomaASG_c10035_g1_i1
342bp
FPKM:9.89 TPM:7.74
28 A_BomaASG_c10037_g1_i1
210bp
FPKM:1.84 TPM:1.44
29 A_BomaASG_c1003_g1_i1
340bp
FPKM:0.59 TPM:0.46
30 A_BomaASG_c10041_g1_i1
454bp
uncharacterized_protein_LOC101742027_[Bombyx_mori]
FPKM:2.92 TPM:2.28
next from show/60564

- SilkBase 1999-2023 -