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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
601 A_BomoMSG_c10665_g1_i1
286bp
hypothetical_protein_O7E_02948,_partial_[Escherichia_coli_O104:H4_str._Ec11-5604]
FPKM:4.40 TPM:2.29
602 A_BomoMSG_c10666_g1_i1
747bp
 mucin-5AC_[Bombyx_mori]
FPKM:1.91 TPM:0.99
603 A_BomoMSG_c10666_g1_i2
334bp
 mucin-5AC_[Bombyx_mori]
FPKM:0.00 TPM:0.00
604 A_BomoMSG_c10667_g1_i1
598bp
 zinc_finger_protein_484_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.01 TPM:1.04
605 A_BomoMSG_c10668_g1_i1
510bp
FPKM:2.83 TPM:1.47
606 A_BomoMSG_c10669_g1_i1
373bp
 regulation_of_nuclear_pre-mRNA_domain-containing_protein_2-like_[Bombyx_mori]
FPKM:4.30 TPM:2.24
607 A_BomoMSG_c1066_g1_i1
226bp
 phosphatidylinositide_phosphatase_SAC2_isoform_X2_[Bombyx_mori]
FPKM:3.07 TPM:1.60
608 A_BomoMSG_c10670_g1_i1
690bp
FPKM:3.11 TPM:1.62
609 A_BomoMSG_c10672_g1_i1
208bp
FPKM:2.93 TPM:1.52
610 A_BomoMSG_c10674_g1_i1
291bp
 PREDICTED:_ras_GTPase-activating_protein_1_[Papilio_polytes]
GO:0000281 P mitotic cytokinesis
GO:0001570 P vasculogenesis
GO:0001934 P positive regulation of protein phosphorylation
GO:0001953 P negative regulation of cell-matrix adhesion
GO:0005096 F GTPase activator activity
GO:0005161 F platelet-derived growth factor receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007162 P negative regulation of cell adhesion
GO:0007165 P signal transduction
GO:0008134 F transcription factor binding
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0019900 F kinase binding
GO:0030036 P actin cytoskeleton organization
GO:0030539 P male genitalia development
GO:0030833 P regulation of actin filament polymerization
GO:0030971 F receptor tyrosine kinase binding
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0031965 C nuclear membrane
GO:0032403 F protein-containing complex binding
GO:0032868 P response to insulin
GO:0036120 P cellular response to platelet-derived growth factor stimulus
GO:0042493 P response to xenobiotic stimulus
GO:0043087 P regulation of GTPase activity
GO:0043422 F protein kinase B binding
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0044325 F transmembrane transporter binding
GO:0044344 P cellular response to fibroblast growth factor stimulus
GO:0046326 P positive regulation of glucose import
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0048146 P positive regulation of fibroblast proliferation
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0071364 P cellular response to epidermal growth factor stimulus
GO:0090630 P activation of GTPase activity
GO:1990782 F protein tyrosine kinase binding
FPKM:3.40 TPM:1.77
611 A_BomoMSG_c10674_g2_i1
278bp
 ras_GTPase-activating_protein_1_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0005096 F GTPase activator activity
GO:0005543 F phospholipid binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0030154 P cell differentiation
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
GO:1903861 P positive regulation of dendrite extension
FPKM:3.27 TPM:1.70
612 A_BomoMSG_c10676_g1_i1
289bp
FPKM:0.79 TPM:0.41
613 A_BomoMSG_c10676_g1_i2
211bp
FPKM:2.03 TPM:1.06
614 A_BomoMSG_c10678_g1_i1
286bp
FPKM:6.60 TPM:3.43
615 A_BomoMSG_c10679_g1_i1
203bp
 ATP-binding_cassette_sub-family_G_member_8_[Bombyx_mori]
FPKM:3.16 TPM:1.64
616 A_BomoMSG_c1067_g1_i1
211bp
FPKM:4.68 TPM:2.43
617 A_BomoMSG_c10680_g1_i1
386bp
 gag-pol_fusion_protein_[Lasius_niger]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:4.57 TPM:2.38
618 A_BomoMSG_c10681_g1_i1
321bp
FPKM:2.10 TPM:1.09
619 A_BomoMSG_c10683_g1_i1
260bp
 yellow-c_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0042438 P melanin biosynthetic process
GO:0060179 P male mating behavior
FPKM:3.25 TPM:1.69
620 A_BomoMSG_c10684_g1_i1
845bp
 inositol-3-phosphate_synthase_[Bombyx_mori]
GO:0004512 F inositol-3-phosphate synthase activity
GO:0005737 C cytoplasm
GO:0006021 P inositol biosynthetic process
GO:0006629 P lipid metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016853 F isomerase activity
FPKM:2.93 TPM:1.52
621 A_BomoMSG_c10685_g1_i1
569bp
FPKM:17.59 TPM:9.15
622 A_BomoMSG_c10686_g1_i1
373bp
FPKM:2.96 TPM:1.54
623 A_BomoMSG_c10687_g1_i1
238bp
FPKM:0.67 TPM:0.35
624 A_BomoMSG_c10689_g1_i1
702bp
FPKM:0.00 TPM:0.00
625 A_BomoMSG_c10689_g1_i2
811bp
FPKM:1.54 TPM:0.80
626 A_BomoMSG_c1068_g1_i1
306bp
FPKM:1.54 TPM:0.80
627 A_BomoMSG_c10690_g1_i1
326bp
FPKM:5.45 TPM:2.83
628 A_BomoMSG_c10691_g1_i1
257bp
 PREDICTED:_uncharacterized_protein_LOC105388554_[Plutella_xylostella]
FPKM:0.56 TPM:0.29
629 A_BomoMSG_c10692_g1_i1
289bp
FPKM:4.58 TPM:2.38
630 A_BomoMSG_c10692_g1_i2
416bp
FPKM:3.01 TPM:1.57
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