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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2191 A_BomoMSG_c12420_g1_i2
418bp
 protein_O-mannosyl-transferase_2_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0000032 P cell wall mannoprotein biosynthetic process
GO:0004169 F dolichyl-phosphate-mannose-protein mannosyltransferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006493 P protein O-linked glycosylation
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016203 P muscle attachment
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030259 P lipid glycosylation
GO:0031502 C dolichyl-phosphate-mannose-protein mannosyltransferase complex
GO:0035269 P protein O-linked mannosylation
GO:0044845 P chain elongation of O-linked mannose residue
GO:0045214 P sarcomere organization
GO:1900101 P regulation of endoplasmic reticulum unfolded protein response
FPKM:0.00 TPM:0.00
2192 A_BomoMSG_c12421_g1_i1
275bp
FPKM:2.87 TPM:1.49
2193 A_BomoMSG_c12423_g1_i1
268bp
FPKM:4.05 TPM:2.11
2194 A_BomoMSG_c12424_g1_i1
262bp
FPKM:1.55 TPM:0.80
2195 A_BomoMSG_c12425_g1_i1
542bp
 olfactory_receptor_[Bombyx_mori]
FPKM:2.45 TPM:1.27
2196 A_BomoMSG_c12426_g1_i1
394bp
 peptidoglycan-recognition_protein_LE-like_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0008270 F zinc ion binding
GO:0008340 P determination of adult lifespan
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0009617 P response to bacterium
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019731 P antibacterial humoral response
GO:0031240 C external side of cell outer membrane
GO:0042834 F peptidoglycan binding
GO:0045087 P innate immune response
GO:0046329 P negative regulation of JNK cascade
GO:0061057 P peptidoglycan recognition protein signaling pathway
GO:0098542 P defense response to other organism
FPKM:4.18 TPM:2.17
2197 A_BomoMSG_c12428_g1_i1
497bp
FPKM:3.28 TPM:1.71
2198 A_BomoMSG_c12429_g1_i1
252bp
FPKM:2.91 TPM:1.52
2199 A_BomoMSG_c12429_g2_i1
246bp
FPKM:0.62 TPM:0.32
2200 A_BomoMSG_c12431_g1_i1
394bp
FPKM:9.83 TPM:5.11
2201 A_BomoMSG_c12432_g1_i1
378bp
FPKM:2.89 TPM:1.50
2202 A_BomoMSG_c12433_g1_i1
217bp
 anaphase-promoting_complex_subunit_1_[Bombyx_mori]
FPKM:0.86 TPM:0.45
2203 A_BomoMSG_c12434_g1_i1
498bp
 defensin-like_protein_precursor_[Bombyx_mori]
FPKM:25.16 TPM:13.09
2204 A_BomoMSG_c12435_g1_i1
381bp
 phospholipid_phosphatase_2_isoform_X3_[Bombyx_mori]
FPKM:1.56 TPM:0.81
2205 A_BomoMSG_c12439_g1_i1
231bp
FPKM:12.32 TPM:6.41
2206 A_BomoMSG_c1243_g1_i1
498bp
 nitric_oxide_synthase_isoform_X1_[Bombyx_mori]
GO:0004517 F nitric-oxide synthase activity
GO:0005506 F iron ion binding
GO:0005516 F calmodulin binding
GO:0006809 P nitric oxide biosynthetic process
GO:0010181 F FMN binding
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0050661 F NADP binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:4.82 TPM:2.51
2207 A_BomoMSG_c12440_g1_i1
372bp
FPKM:2.70 TPM:1.40
2208 A_BomoMSG_c12442_g1_i1
340bp
 protein_MON2_homolog_[Bombyx_mori]
GO:0006810 P transport
GO:0015031 P protein transport
FPKM:6.63 TPM:3.45
2209 A_BomoMSG_c12443_g1_i1
212bp
 zinc_finger_MYM-type_protein_1-like_[Parasteatoda_tepidariorum]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
FPKM:0.00 TPM:0.00
2210 A_BomoMSG_c12445_g1_i1
634bp
 LOW_QUALITY_PROTEIN:_histone-lysine_N-methyltransferase_2C_[Bombyx_mori]
FPKM:3.59 TPM:1.87
2211 A_BomoMSG_c12447_g1_i1
276bp
 nuclear_hormone_receptor_HR96_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0030522 P intracellular receptor signaling pathway
GO:0042594 P response to starvation
GO:0042632 P cholesterol homeostasis
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
GO:0070328 P triglyceride homeostasis
GO:0070873 P regulation of glycogen metabolic process
FPKM:3.79 TPM:1.97
2212 A_BomoMSG_c12449_g1_i1
536bp
FPKM:2.17 TPM:1.13
2213 A_BomoMSG_c12450_g1_i1
298bp
FPKM:6.07 TPM:3.16
2214 A_BomoMSG_c12452_g1_i1
234bp
FPKM:1.40 TPM:0.73
2215 A_BomoMSG_c12454_g1_i1
257bp
FPKM:2.23 TPM:1.16
2216 A_BomoMSG_c12455_g1_i1
207bp
 CUB_and_sushi_domain-containing_protein_3_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2217 A_BomoMSG_c12455_g1_i2
480bp
 CUB_and_sushi_domain-containing_protein_3_isoform_X2_[Bombyx_mori]
FPKM:1.63 TPM:0.85
2218 A_BomoMSG_c12456_g1_i1
638bp
FPKM:1.84 TPM:0.96
2219 A_BomoMSG_c12457_g1_i1
321bp
 regulatory-associated_protein_of_TOR_[Bombyx_mori]
FPKM:3.15 TPM:1.64
2220 A_BomoMSG_c12458_g1_i1
204bp
FPKM:11.41 TPM:5.94
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