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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1921 A_BomoMSG_c1212_g1_i1
399bp
 protein_takeout_[Bombyx_mori]
FPKM:2.41 TPM:1.25
1922 A_BomoMSG_c12130_g1_i1
900bp
 unconventional_myosin-IXa_isoform_X4_[Bombyx_mori]
FPKM:2.24 TPM:1.16
1923 A_BomoMSG_c12131_g1_i1
286bp
FPKM:0.88 TPM:0.46
1924 A_BomoMSG_c12134_g1_i1
320bp
 FAS-associated_factor_1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0007253 P cytoplasmic sequestering of NF-kappaB
GO:0008219 P cell death
GO:0010942 P positive regulation of cell death
GO:0019887 F protein kinase regulator activity
GO:0019901 F protein kinase binding
GO:0019904 F protein domain specific binding
GO:0030155 P regulation of cell adhesion
GO:0031072 F heat shock protein binding
GO:0031265 C CD95 death-inducing signaling complex
GO:0031334 P positive regulation of protein-containing complex assembly
GO:0031625 F ubiquitin protein ligase binding
GO:0034098 C VCP-NPL4-UFD1 AAA ATPase complex
GO:0042176 P regulation of protein catabolic process
GO:0043065 P positive regulation of apoptotic process
GO:0043130 F ubiquitin binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045859 P regulation of protein kinase activity
GO:0048471 C perinuclear region of cytoplasm
GO:0051059 F NF-kappaB binding
GO:1902043 P positive regulation of extrinsic apoptotic signaling pathway via death domain receptors
FPKM:5.64 TPM:2.93
1925 A_BomoMSG_c12135_g1_i1
230bp
 synaptic_vesicle_2-related_protein_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0009507 C chloroplast
GO:0009536 C plastid
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0031969 C chloroplast membrane
GO:0055085 P transmembrane transport
FPKM:2.93 TPM:1.53
1926 A_BomoMSG_c12136_g1_i1
297bp
 uncharacterized_protein_LOC101742438_[Bombyx_mori]
FPKM:3.26 TPM:1.70
1927 A_BomoMSG_c12137_g1_i1
363bp
FPKM:3.66 TPM:1.90
1928 A_BomoMSG_c12138_g1_i1
249bp
FPKM:7.20 TPM:3.74
1929 A_BomoMSG_c12139_g1_i1
616bp
 adhesion_G_protein-coupled_receptor_A3_[Helicoverpa_armigera]
FPKM:2.31 TPM:1.20
1930 A_BomoMSG_c1213_g1_i1
642bp
FPKM:4.74 TPM:2.46
1931 A_BomoMSG_c12140_g1_i1
439bp
 putative_steroid_receptor-interacting_snf2_domain_protein_[Danaus_plexippus_plexippus]
FPKM:3.32 TPM:1.73
1932 A_BomoMSG_c12141_g1_i1
399bp
FPKM:5.30 TPM:2.75
1933 A_BomoMSG_c12143_g1_i1
222bp
FPKM:5.65 TPM:2.94
1934 A_BomoMSG_c12144_g1_i1
609bp
 phosphoglycolate_phosphatase_1B,_chloroplastic_isoform_X2_[Bombyx_mori]
GO:0000121 F glycerol-1-phosphatase activity
GO:0000287 F magnesium ion binding
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006114 P glycerol biosynthetic process
GO:0006650 P glycerophospholipid metabolic process
GO:0008152 P metabolic process
GO:0008967 F phosphoglycolate phosphatase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0043136 F glycerol-3-phosphatase activity
GO:0045721 P negative regulation of gluconeogenesis
GO:0046872 F metal ion binding
GO:0098519 F nucleotide phosphatase activity, acting on free nucleotides
FPKM:3.26 TPM:1.70
1935 A_BomoMSG_c12145_g1_i1
232bp
 uncharacterized_protein_LOC105841502_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0032502 P developmental process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.87 TPM:1.49
1936 A_BomoMSG_c12148_g1_i1
322bp
 uncharacterized_protein_LOC101740912_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1937 A_BomoMSG_c12148_g1_i2
320bp
 uncharacterized_protein_LOC101740912_[Bombyx_mori]
FPKM:1.76 TPM:0.92
1938 A_BomoMSG_c12149_g1_i1
588bp
FPKM:3.28 TPM:1.71
1939 A_BomoMSG_c12152_g1_i1
253bp
FPKM:1.73 TPM:0.90
1940 A_BomoMSG_c12154_g1_i1
206bp
FPKM:1.17 TPM:0.61
1941 A_BomoMSG_c12154_g1_i2
440bp
 hypothetical_protein_[Bactrocera_tryoni]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:4.51 TPM:2.35
1942 A_BomoMSG_c12157_g1_i1
495bp
FPKM:3.13 TPM:1.63
1943 A_BomoMSG_c12159_g1_i1
226bp
FPKM:3.07 TPM:1.60
1944 A_BomoMSG_c1215_g1_i1
244bp
FPKM:3.15 TPM:1.64
1945 A_BomoMSG_c12160_g1_i1
329bp
FPKM:2.01 TPM:1.05
1946 A_BomoMSG_c12161_g1_i1
256bp
 deoxyribodipyrimidine_photo-lyase_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003904 F deoxyribodipyrimidine photo-lyase activity
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016829 F lyase activity
GO:0018298 P protein-chromophore linkage
FPKM:2.34 TPM:1.22
1947 A_BomoMSG_c12161_g1_i2
275bp
 deoxyribodipyrimidine_photo-lyase_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003904 F deoxyribodipyrimidine photo-lyase activity
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016829 F lyase activity
GO:0018298 P protein-chromophore linkage
FPKM:1.83 TPM:0.95
1948 A_BomoMSG_c12162_g1_i1
340bp
FPKM:1.58 TPM:0.82
1949 A_BomoMSG_c12162_g1_i2
298bp
FPKM:0.00 TPM:0.00
1950 A_BomoMSG_c12163_g1_i1
204bp
FPKM:8.30 TPM:4.32
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