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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1501 A_BomoMSG_c11640_g1_i1
759bp
 enhancer_of_polycomb_homolog_1,_partial_[Bombyx_mori]
FPKM:2.07 TPM:1.07
1502 A_BomoMSG_c11641_g1_i1
229bp
FPKM:7.42 TPM:3.86
1503 A_BomoMSG_c11642_g1_i1
489bp
FPKM:0.00 TPM:0.00
1504 A_BomoMSG_c11642_g1_i2
1062bp
FPKM:14.25 TPM:7.41
1505 A_BomoMSG_c11643_g1_i1
502bp
 protein_MCM10_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003682 F chromatin binding
GO:0003688 F DNA replication origin binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0016321 P female meiosis chromosome segregation
GO:0030261 P chromosome condensation
GO:0031298 C replication fork protection complex
GO:0035214 P eye-antennal disc development
GO:0042023 P DNA endoreduplication
GO:0045678 P positive regulation of R7 cell differentiation
GO:0045931 P positive regulation of mitotic cell cycle
GO:0046872 F metal ion binding
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:1901693 P negative regulation of compound eye retinal cell apoptotic process
FPKM:3.40 TPM:1.77
1506 A_BomoMSG_c11644_g1_i1
719bp
 uncharacterized_protein_LOC110377703_isoform_X1_[Helicoverpa_armigera]
FPKM:2.21 TPM:1.15
1507 A_BomoMSG_c11645_g1_i1
302bp
FPKM:3.55 TPM:1.85
1508 A_BomoMSG_c11646_g1_i1
387bp
FPKM:2.28 TPM:1.18
1509 A_BomoMSG_c11647_g1_i1
250bp
 LOW_QUALITY_PROTEIN:_histone-lysine_N-methyltransferase_2C_[Bombyx_mori]
FPKM:1.19 TPM:0.62
1510 A_BomoMSG_c11648_g1_i1
254bp
 Potassium_voltage-gated_channel_protein_Shab,_partial_[Operophtera_brumata]
GO:0001508 P action potential
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005251 F delayed rectifier potassium channel activity
GO:0005267 F potassium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007268 P chemical synaptic transmission
GO:0008016 P regulation of heart contraction
GO:0008076 C voltage-gated potassium channel complex
GO:0008345 P larval locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0048812 P neuron projection morphogenesis
GO:0051260 P protein homooligomerization
GO:0055085 P transmembrane transport
GO:0060025 P regulation of synaptic activity
GO:0071805 P potassium ion transmembrane transport
FPKM:0.00 TPM:0.00
1511 A_BomoMSG_c11648_g1_i2
469bp
 potassium_voltage-gated_channel_protein_Shab_isoform_X3_[Bombyx_mori]
GO:0001508 P action potential
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005251 F delayed rectifier potassium channel activity
GO:0005267 F potassium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007268 P chemical synaptic transmission
GO:0008016 P regulation of heart contraction
GO:0008076 C voltage-gated potassium channel complex
GO:0008345 P larval locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0048812 P neuron projection morphogenesis
GO:0051260 P protein homooligomerization
GO:0055085 P transmembrane transport
GO:0060025 P regulation of synaptic activity
GO:0071805 P potassium ion transmembrane transport
FPKM:1.31 TPM:0.68
1512 A_BomoMSG_c1164_g1_i1
249bp
FPKM:1.80 TPM:0.94
1513 A_BomoMSG_c11653_g1_i1
713bp
 uncharacterized_protein_LOC101746086_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
FPKM:2.77 TPM:1.44
1514 A_BomoMSG_c11654_g1_i1
335bp
 zinc_finger_protein_600-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:4.21 TPM:2.19
1515 A_BomoMSG_c11655_g1_i1
540bp
 translation_elongation_factor_2_isoform_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003746 F translation elongation factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006414 P translational elongation
GO:0008150 P biological_process
FPKM:4.45 TPM:2.32
1516 A_BomoMSG_c11656_g1_i1
439bp
 uncharacterized_protein_LOC105841800_[Bombyx_mori]
FPKM:1.87 TPM:0.97
1517 A_BomoMSG_c11658_g1_i1
209bp
 E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1518 A_BomoMSG_c11658_g1_i2
356bp
 E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
FPKM:2.33 TPM:1.21
1519 A_BomoMSG_c11659_g1_i1
1803bp
 uncharacterized_protein_LOC101736145_isoform_X1_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007275 P multicellular organism development
GO:0007423 P sensory organ development
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0045676 P regulation of R7 cell differentiation
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
FPKM:28.57 TPM:14.87
1520 A_BomoMSG_c1165_g1_i1
279bp
 uncharacterized_protein_LOC101740706,_partial_[Bombyx_mori]
FPKM:1.39 TPM:0.72
1521 A_BomoMSG_c11660_g1_i1
346bp
FPKM:3.36 TPM:1.75
1522 A_BomoMSG_c11661_g1_i1
389bp
 adipokinetic_hormone_3_[Bombyx_mori]
FPKM:1.50 TPM:0.78
1523 A_BomoMSG_c11663_g1_i1
2282bp
 fibulin-1,_partial_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0005178 F integrin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0007155 P cell adhesion
GO:0008022 F protein C-terminus binding
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0034394 P protein localization to cell surface
GO:0042803 F protein homodimerization activity
GO:0046903 P secretion
GO:0048251 P elastic fiber assembly
GO:0070062 C extracellular exosome
GO:0071953 C elastic fiber
GO:2000121 P regulation of removal of superoxide radicals
FPKM:54.14 TPM:28.16
1524 A_BomoMSG_c11664_g1_i1
765bp
 uncharacterized_protein_LOC101742672_isoform_X3_[Bombyx_mori]
FPKM:7.30 TPM:3.80
1525 A_BomoMSG_c11665_g1_i1
1263bp
 uncharacterized_protein_LOC101736775_[Bombyx_mori]
FPKM:32.77 TPM:17.05
1526 A_BomoMSG_c11666_g1_i1
1415bp
 cytosolic_malate_dehydrogenase_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0003824 F catalytic activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006099 P tricarboxylic acid cycle
GO:0006107 P oxaloacetate metabolic process
GO:0006108 P malate metabolic process
GO:0006734 P NADH metabolic process
GO:0016491 F oxidoreductase activity
GO:0016615 F malate dehydrogenase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019674 P NAD metabolic process
GO:0019752 P carboxylic acid metabolic process
GO:0030060 F L-malate dehydrogenase activity
GO:0043209 C myelin sheath
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
FPKM:368.93 TPM:191.92
1527 A_BomoMSG_c11669_g1_i1
418bp
FPKM:4.47 TPM:2.33
1528 A_BomoMSG_c11671_g1_i1
299bp
FPKM:6.03 TPM:3.14
1529 A_BomoMSG_c11672_g1_i1
546bp
 ribosomal_protein_S7_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:3.48 TPM:1.81
1530 A_BomoMSG_c11673_g1_i1
281bp
FPKM:4.11 TPM:2.14
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