SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/58621
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
691 A_BomoASG_c11044_g1_i1
337bp
 uncharacterized_protein_LOC110376631_[Helicoverpa_armigera]
FPKM:2.57 TPM:1.97
692 A_BomoASG_c11045_g1_i1
491bp
FPKM:4.37 TPM:3.36
693 A_BomoASG_c11046_g1_i1
554bp
FPKM:7.05 TPM:5.41
694 A_BomoASG_c11047_g1_i1
345bp
 PREDICTED:_uncharacterized_protein_LOC106142604_[Amyelois_transitella]
FPKM:2.16 TPM:1.65
695 A_BomoASG_c11048_g1_i1
215bp
FPKM:3.62 TPM:2.77
696 A_BomoASG_c11049_g1_i1
257bp
 protease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:1.13 TPM:0.86
697 A_BomoASG_c11050_g1_i1
249bp
FPKM:3.65 TPM:2.80
698 A_BomoASG_c11051_g1_i1
458bp
FPKM:6.40 TPM:4.91
699 A_BomoASG_c11052_g1_i1
310bp
FPKM:2.26 TPM:1.73
700 A_BomoASG_c11053_g1_i1
336bp
FPKM:5.82 TPM:4.46
701 A_BomoASG_c11054_g1_i1
406bp
FPKM:2.57 TPM:1.97
702 A_BomoASG_c11055_g1_i1
250bp
 PREDICTED:_uncharacterized_protein_LOC108907647_[Anoplophora_glabripennis]
FPKM:3.01 TPM:2.31
703 A_BomoASG_c11058_g1_i1
228bp
 gag-like_protein_[Bombyx_mori]
FPKM:3.06 TPM:2.35
704 A_BomoASG_c11062_g1_i1
209bp
FPKM:0.99 TPM:0.76
705 A_BomoASG_c11063_g1_i1
391bp
 fasciculation_and_elongation_protein_zeta-2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:1902902 P negative regulation of autophagosome assembly
FPKM:1.99 TPM:1.53
706 A_BomoASG_c11064_g1_i1
280bp
 reverse_transcriptase,_partial_[Spodoptera_frugiperda]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:4.18 TPM:3.20
707 A_BomoASG_c11065_g1_i1
291bp
FPKM:1.28 TPM:0.98
708 A_BomoASG_c1106_g1_i1
301bp
FPKM:2.79 TPM:2.14
709 A_BomoASG_c11070_g1_i1
441bp
FPKM:2.26 TPM:1.73
710 A_BomoASG_c11071_g1_i1
250bp
 uncharacterized_protein_LOC110385953_[Bombyx_mori]
FPKM:1.81 TPM:1.39
711 A_BomoASG_c11072_g1_i1
339bp
FPKM:3.18 TPM:2.44
712 A_BomoASG_c11074_g1_i1
538bp
FPKM:2.30 TPM:1.77
713 A_BomoASG_c11076_g1_i1
212bp
FPKM:0.94 TPM:0.72
714 A_BomoASG_c11077_g1_i1
219bp
 putative_alternative_oxidase_[Danaus_plexippus_plexippus]
FPKM:0.86 TPM:0.66
715 A_BomoASG_c11078_g1_i1
252bp
FPKM:8.27 TPM:6.34
716 A_BomoASG_c11080_g1_i1
393bp
FPKM:5.67 TPM:4.35
717 A_BomoASG_c11082_g1_i1
261bp
FPKM:2.17 TPM:1.67
718 A_BomoASG_c11083_g1_i1
238bp
 LOW_QUALITY_PROTEIN:_collagen_alpha-1(I)_chain_[Bombyx_mori]
GO:0001501 P skeletal system development
GO:0005201 F extracellular matrix structural constituent
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005592 C collagen type XI trimer
GO:0005788 C endoplasmic reticulum lumen
GO:0007605 P sensory perception of sound
GO:0030020 F extracellular matrix structural constituent conferring tensile strength
GO:0030199 P collagen fibril organization
GO:0030574 P collagen catabolic process
GO:0030674 F protein-macromolecule adaptor activity
GO:0046872 F metal ion binding
GO:0051216 P cartilage development
GO:0060021 P roof of mouth development
GO:0060023 P soft palate development
FPKM:3.41 TPM:2.61
719 A_BomoASG_c11084_g1_i1
243bp
 uncharacterized_protein_LOC110385954_[Bombyx_mori]
FPKM:11.63 TPM:8.92
720 A_BomoASG_c11087_g1_i1
274bp
FPKM:0.97 TPM:0.75
previous next from show/58621

- SilkBase 1999-2023 -