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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5431 A_BomoASG_c16489_g1_i1
224bp
 uncharacterized_protein_LOC105842098_[Bombyx_mori]
FPKM:4.02 TPM:3.09
5432 A_BomoASG_c16489_g1_i2
849bp
 uncharacterized_protein_LOC105842098_[Bombyx_mori]
FPKM:2.80 TPM:2.15
5433 A_BomoASG_c16490_g1_i1
566bp
 protein_ALP1-like_[Helicoverpa_armigera]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:3.29 TPM:2.53
5434 A_BomoASG_c16490_g2_i1
214bp
 uncharacterized_protein_LOC101741497_[Bombyx_mori]
FPKM:1.83 TPM:1.41
5435 A_BomoASG_c16491_g1_i1
276bp
 uncharacterized_protein_LOC110385577_[Bombyx_mori]
FPKM:1.92 TPM:1.47
5436 A_BomoASG_c16492_g1_i1
208bp
FPKM:3.00 TPM:2.30
5437 A_BomoASG_c16494_g1_i1
222bp
FPKM:2.47 TPM:1.90
5438 A_BomoASG_c16495_g1_i1
365bp
 DNA_replication_complex_GINS_protein_PSF3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006260 P DNA replication
FPKM:4.75 TPM:3.64
5439 A_BomoASG_c16496_g1_i1
320bp
 DNA_polymerase_theta_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003684 F damaged DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006302 P double-strand break repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0043142 F single-stranded DNA helicase activity
GO:0051260 P protein homooligomerization
GO:0051575 F 5'-deoxyribose-5-phosphate lyase activity
GO:0071897 P DNA biosynthetic process
GO:0097681 P double-strand break repair via alternative nonhomologous end joining
GO:2000042 P negative regulation of double-strand break repair via homologous recombination
FPKM:2.48 TPM:1.90
5440 A_BomoASG_c16497_g1_i1
281bp
FPKM:4.15 TPM:3.18
5441 A_BomoASG_c16497_g2_i1
290bp
FPKM:2.15 TPM:1.65
5442 A_BomoASG_c16498_g1_i1
294bp
FPKM:7.54 TPM:5.78
5443 A_BomoASG_c16499_g1_i1
214bp
FPKM:1.83 TPM:1.41
5444 A_BomoASG_c1649_g1_i1
203bp
FPKM:1.08 TPM:0.83
5445 A_BomoASG_c16500_g1_i1
398bp
 protein_kibra_isoform_X2_[Bombyx_mori]
FPKM:2.12 TPM:1.62
5446 A_BomoASG_c16500_g1_i2
410bp
 protein_kibra_isoform_X2_[Bombyx_mori]
FPKM:1.43 TPM:1.10
5447 A_BomoASG_c16501_g1_i1
277bp
FPKM:8.55 TPM:6.56
5448 A_BomoASG_c16503_g1_i1
356bp
FPKM:2.33 TPM:1.79
5449 A_BomoASG_c16504_g1_i1
855bp
 uncharacterized_protein_LOC101737106_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003993 F acid phosphatase activity
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0010909 P positive regulation of heparan sulfate proteoglycan biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0050650 P chondroitin sulfate proteoglycan biosynthetic process
FPKM:0.59 TPM:0.45
5450 A_BomoASG_c16504_g1_i2
527bp
 uncharacterized_protein_LOC101737106_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003993 F acid phosphatase activity
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0010909 P positive regulation of heparan sulfate proteoglycan biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0050650 P chondroitin sulfate proteoglycan biosynthetic process
FPKM:1.09 TPM:0.83
5451 A_BomoASG_c16504_g1_i3
867bp
 uncharacterized_protein_LOC101737106_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003993 F acid phosphatase activity
GO:0005794 C Golgi apparatus
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0010909 P positive regulation of heparan sulfate proteoglycan biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0050650 P chondroitin sulfate proteoglycan biosynthetic process
FPKM:3.08 TPM:2.36
5452 A_BomoASG_c16505_g1_i1
739bp
 uncharacterized_protein_LOC101742154_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0008283 P cell population proliferation
GO:0010666 P positive regulation of cardiac muscle cell apoptotic process
GO:0010976 P positive regulation of neuron projection development
GO:0014065 P phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0043066 P negative regulation of apoptotic process
GO:0071300 P cellular response to retinoic acid
FPKM:1.31 TPM:1.01
5453 A_BomoASG_c16505_g2_i1
364bp
 uncharacterized_protein_LOC101742154_isoform_X2_[Bombyx_mori]
FPKM:1.16 TPM:0.89
5454 A_BomoASG_c16505_g2_i2
457bp
 uncharacterized_protein_LOC101742154_isoform_X2_[Bombyx_mori]
FPKM:0.95 TPM:0.73
5455 A_BomoASG_c16506_g1_i1
267bp
FPKM:2.06 TPM:1.58
5456 A_BomoASG_c16508_g1_i1
303bp
FPKM:6.30 TPM:4.83
5457 A_BomoASG_c16509_g1_i1
253bp
FPKM:5.26 TPM:4.04
5458 A_BomoASG_c16512_g1_i1
284bp
FPKM:7.20 TPM:5.53
5459 A_BomoASG_c16514_g1_i1
312bp
FPKM:26.40 TPM:20.25
5460 A_BomoASG_c16516_g1_i1
433bp
FPKM:1.90 TPM:1.46
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