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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5371 A_BomoASG_c16423_g1_i1
376bp
 PREDICTED:_general_transcription_factor_3C_polypeptide_3_[Papilio_polytes]
GO:0000127 C transcription factor TFIIIC complex
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0031965 C nuclear membrane
GO:0042791 P 5S class rRNA transcription by RNA polymerase III
GO:0042797 P tRNA transcription by RNA polymerase III
FPKM:8.22 TPM:6.31
5372 A_BomoASG_c16424_g1_i1
237bp
 PREDICTED:_uncharacterized_protein_LOC108911126,_partial_[Anoplophora_glabripennis]
FPKM:1.38 TPM:1.06
5373 A_BomoASG_c16424_g1_i2
350bp
 PREDICTED:_uncharacterized_protein_LOC108911126,_partial_[Anoplophora_glabripennis]
FPKM:1.20 TPM:0.92
5374 A_BomoASG_c16425_g1_i1
311bp
 zinc_finger_protein_208_[Bombyx_mori]
FPKM:5.24 TPM:4.02
5375 A_BomoASG_c16426_g1_i1
1379bp
 cleavage_stimulation_factor_subunit_2_tau_variant_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
GO:0071920 C cleavage body
GO:0098789 P pre-mRNA cleavage required for polyadenylation
FPKM:28.24 TPM:21.66
5376 A_BomoASG_c16427_g1_i1
204bp
 phosphatidate_cytidylyltransferase,_mitochondrial_[Bombyx_mori]
GO:0004605 F phosphatidate cytidylyltransferase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006629 P lipid metabolic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0031314 C extrinsic component of mitochondrial inner membrane
GO:0032049 P cardiolipin biosynthetic process
FPKM:10.64 TPM:8.16
5377 A_BomoASG_c16428_g1_i1
667bp
 PB1_[Shuangao_Insect_Virus_4]
FPKM:3.11 TPM:2.38
5378 A_BomoASG_c16429_g1_i1
293bp
FPKM:0.84 TPM:0.65
5379 A_BomoASG_c16431_g1_i1
386bp
FPKM:1.02 TPM:0.78
5380 A_BomoASG_c16432_g1_i1
544bp
FPKM:5.15 TPM:3.95
5381 A_BomoASG_c16434_g1_i1
1050bp
FPKM:40.65 TPM:31.18
5382 A_BomoASG_c16435_g1_i1
450bp
FPKM:4.38 TPM:3.36
5383 A_BomoASG_c16437_g1_i1
218bp
FPKM:0.87 TPM:0.67
5384 A_BomoASG_c16438_g1_i1
373bp
 disks_large-associated_protein_5_isoform_X1_[Bombyx_mori]
FPKM:2.15 TPM:1.65
5385 A_BomoASG_c16439_g1_i1
254bp
 type_I_inositol_1,4,5-trisphosphate_5-phosphatase_isoform_X2_[Bombyx_mori]
FPKM:0.00 TPM:0.00
5386 A_BomoASG_c1643_g1_i1
381bp
FPKM:4.93 TPM:3.78
5387 A_BomoASG_c16440_g1_i1
254bp
FPKM:0.00 TPM:0.00
5388 A_BomoASG_c16442_g1_i1
1627bp
 la_protein_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0030529 C ribonucleoprotein complex
FPKM:15.25 TPM:11.70
5389 A_BomoASG_c16442_g1_i2
1646bp
 la_protein_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0030529 C ribonucleoprotein complex
FPKM:26.46 TPM:20.29
5390 A_BomoASG_c16444_g1_i1
609bp
FPKM:4.80 TPM:3.68
5391 A_BomoASG_c16445_g1_i1
365bp
FPKM:3.63 TPM:2.78
5392 A_BomoASG_c16446_g1_i1
245bp
 uncharacterized_protein_LOC101743719_[Bombyx_mori]
FPKM:0.63 TPM:0.49
5393 A_BomoASG_c16448_g1_i1
487bp
 ubiquitin-like_protein_5_[Helicoverpa_armigera]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0022008 P neurogenesis
GO:0031386 F protein tag
GO:0034126 P positive regulation of MyD88-dependent toll-like receptor signaling pathway
FPKM:46.35 TPM:35.55
5394 A_BomoASG_c16449_g1_i1
254bp
FPKM:2.32 TPM:1.78
5395 A_BomoASG_c1644_g1_i1
663bp
 E3_ubiquitin-protein_ligase_HERC2_[Papilio_xuthus]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005743 C mitochondrial inner membrane
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006886 P intracellular protein transport
GO:0006974 P cellular response to DNA damage stimulus
GO:0007283 P spermatogenesis
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0031625 F ubiquitin protein ligase binding
GO:0032183 F SUMO binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
FPKM:1.74 TPM:1.33
5396 A_BomoASG_c16451_g1_i1
547bp
FPKM:4.35 TPM:3.34
5397 A_BomoASG_c16452_g1_i1
506bp
FPKM:2.18 TPM:1.67
5398 A_BomoASG_c16453_g1_i1
228bp
FPKM:3.06 TPM:2.35
5399 A_BomoASG_c16455_g1_i1
344bp
FPKM:5.89 TPM:4.51
5400 A_BomoASG_c16456_g1_i1
323bp
FPKM:4.17 TPM:3.20
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