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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5101 A_BomoASG_c16111_g1_i1
996bp
 ovary_C/EBPg_transcription_factor_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001889 P liver development
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006337 P nucleosome disassembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006955 P immune response
GO:0008134 F transcription factor binding
GO:0016071 P mRNA metabolic process
GO:0030183 P B cell differentiation
GO:0042267 P natural killer cell mediated cytotoxicity
GO:0042803 F protein homodimerization activity
GO:0043353 P enucleate erythrocyte differentiation
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0043565 F sequence-specific DNA binding
GO:0044377 F RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending
GO:0045078 P positive regulation of interferon-gamma production
GO:0045739 P positive regulation of DNA repair
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
FPKM:30.08 TPM:23.07
5102 A_BomoASG_c16112_g1_i1
472bp
FPKM:1.48 TPM:1.14
5103 A_BomoASG_c16113_g1_i1
463bp
FPKM:4.20 TPM:3.22
5104 A_BomoASG_c16114_g1_i1
221bp
FPKM:2.50 TPM:1.92
5105 A_BomoASG_c16114_g2_i1
214bp
FPKM:1.83 TPM:1.41
5106 A_BomoASG_c16115_g1_i1
344bp
FPKM:8.67 TPM:6.65
5107 A_BomoASG_c16116_g1_i1
2209bp
FPKM:54.17 TPM:41.55
5108 A_BomoASG_c16118_g1_i1
809bp
 uncharacterized_protein_LOC101742755_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004601 F peroxidase activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030198 P extracellular matrix organization
GO:0042744 P hydrogen peroxide catabolic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
FPKM:3.87 TPM:2.97
5109 A_BomoASG_c16119_g1_i1
321bp
 PREDICTED:_ATP-dependent_DNA_helicase_pif1-like_[Microplitis_demolitor]
GO:0000002 P mitochondrial genome maintenance
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0010521 F telomerase inhibitor activity
GO:0016787 F hydrolase activity
GO:0032211 P negative regulation of telomere maintenance via telomerase
GO:0032508 P DNA duplex unwinding
GO:0043141 F 5'-3' DNA helicase activity
GO:0051880 F G-quadruplex DNA binding
GO:0051974 P negative regulation of telomerase activity
FPKM:0.70 TPM:0.54
5110 A_BomoASG_c1611_g1_i1
3721bp
 saposin-like_protein_[Bombyx_mori]
GO:0001664 F G protein-coupled receptor binding
GO:0002576 P platelet degranulation
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0006687 P glycosphingolipid metabolic process
GO:0006869 P lipid transport
GO:0007193 P adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway
GO:0008047 F enzyme activator activity
GO:0008289 F lipid binding
GO:0010506 P regulation of autophagy
GO:0016021 C integral component of membrane
GO:0019216 P regulation of lipid metabolic process
GO:0043085 P positive regulation of catalytic activity
GO:0043202 C lysosomal lumen
GO:0043408 P regulation of MAPK cascade
GO:0043410 P positive regulation of MAPK cascade
GO:0048589 P developmental growth
GO:0060736 P prostate gland growth
GO:0060742 P epithelial cell differentiation involved in prostate gland development
GO:0070062 C extracellular exosome
GO:0071310 P cellular response to organic substance
GO:1903206 P negative regulation of hydrogen peroxide-induced cell death
FPKM:137.11 TPM:105.17
5111 A_BomoASG_c16120_g1_i1
282bp
FPKM:7.31 TPM:5.61
5112 A_BomoASG_c16121_g1_i1
842bp
FPKM:4.29 TPM:3.29
5113 A_BomoASG_c16122_g1_i1
494bp
 LOW_QUALITY_PROTEIN:_trithorax_group_protein_osa_[Bombyx_mori]
FPKM:6.59 TPM:5.06
5114 A_BomoASG_c16123_g1_i1
474bp
 tigger_transposable_element-derived_protein_4-like_[Bombyx_mori]
FPKM:2.76 TPM:2.12
5115 A_BomoASG_c16124_g1_i1
536bp
FPKM:2.78 TPM:2.13
5116 A_BomoASG_c16125_g1_i1
500bp
FPKM:2.05 TPM:1.57
5117 A_BomoASG_c16127_g1_i1
300bp
 serine/threonine-protein_kinase_ATR_[Bombyx_mori]
FPKM:0.00 TPM:0.00
5118 A_BomoASG_c16127_g1_i2
317bp
 serine/threonine-protein_kinase_ATR_[Bombyx_mori]
FPKM:2.16 TPM:1.66
5119 A_BomoASG_c16128_g1_i1
477bp
FPKM:15.52 TPM:11.90
5120 A_BomoASG_c16130_g1_i1
330bp
 proton-coupled_amino_acid_transporter-like_protein_pathetic_[Bombyx_mori]
GO:0005280 F amino acid:proton symporter activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006865 P amino acid transport
GO:0015078 F proton transmembrane transporter activity
GO:0015171 F amino acid transmembrane transporter activity
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015187 F glycine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015808 P L-alanine transport
GO:0015816 P glycine transport
GO:0015824 P proline transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
GO:0070062 C extracellular exosome
GO:1902600 P proton transmembrane transport
FPKM:2.01 TPM:1.54
5121 A_BomoASG_c16131_g1_i1
297bp
FPKM:2.46 TPM:1.89
5122 A_BomoASG_c16132_g1_i1
538bp
FPKM:4.61 TPM:3.53
5123 A_BomoASG_c16132_g2_i1
457bp
FPKM:3.50 TPM:2.69
5124 A_BomoASG_c16133_g1_i1
250bp
FPKM:4.22 TPM:3.23
5125 A_BomoASG_c16134_g1_i1
317bp
FPKM:0.72 TPM:0.55
5126 A_BomoASG_c16135_g1_i1
453bp
FPKM:4.73 TPM:3.63
5127 A_BomoASG_c16136_g1_i1
310bp
FPKM:0.42 TPM:0.32
5128 A_BomoASG_c16137_g1_i1
406bp
FPKM:6.31 TPM:4.84
5129 A_BomoASG_c16138_g1_i1
329bp
FPKM:2.69 TPM:2.06
5130 A_BomoASG_c16139_g1_i1
268bp
 selenium-binding_protein_1_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0008430 F selenium binding
GO:0015031 P protein transport
GO:0016020 C membrane
FPKM:5.62 TPM:4.31
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