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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5041 A_BomoASG_c16045_g1_i1
297bp
FPKM:9.84 TPM:7.55
5042 A_BomoASG_c16046_g1_i1
432bp
FPKM:5.75 TPM:4.41
5043 A_BomoASG_c16047_g1_i1
500bp
 uncharacterized_protein_LOC101741752_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
FPKM:1.87 TPM:1.44
5044 A_BomoASG_c1604_g1_i1
211bp
FPKM:1.91 TPM:1.47
5045 A_BomoASG_c16050_g1_i1
693bp
 fat-like_cadherin-related_tumor_suppressor_homolog,_partial_[Helicoverpa_armigera]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007163 P establishment or maintenance of cell polarity
GO:0007267 P cell-cell signaling
GO:0009653 P anatomical structure morphogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0016477 P cell migration
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0048471 C perinuclear region of cytoplasm
GO:0070062 C extracellular exosome
FPKM:2.74 TPM:2.10
5046 A_BomoASG_c16050_g1_i2
239bp
 LOW_QUALITY_PROTEIN:_fat-like_cadherin-related_tumor_suppressor_homolog,_partial_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0010631 P epithelial cell migration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
5047 A_BomoASG_c16051_g1_i1
264bp
FPKM:2.12 TPM:1.62
5048 A_BomoASG_c16052_g1_i1
567bp
 beta-N-acetylglucosaminidase_[Bombyx_mori]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563 F beta-N-acetylhexosaminidase activity
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0006491 P N-glycan processing
GO:0006517 P protein deglycosylation
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0008152 P metabolic process
GO:0016063 P rhodopsin biosynthetic process
GO:0016231 F beta-N-acetylglucosaminidase activity
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0032428 F beta-N-acetylgalactosaminidase activity
FPKM:3.00 TPM:2.30
5049 A_BomoASG_c16054_g1_i1
319bp
FPKM:1.42 TPM:1.09
5050 A_BomoASG_c16056_g1_i1
3421bp
 uncharacterized_protein_LOC101744810_isoform_X2_[Bombyx_mori]
FPKM:88.00 TPM:67.50
5051 A_BomoASG_c16056_g1_i2
3405bp
 uncharacterized_protein_LOC101744810_isoform_X2_[Bombyx_mori]
FPKM:8.16 TPM:6.26
5052 A_BomoASG_c16056_g1_i3
3734bp
 uncharacterized_protein_LOC101744810_isoform_X2_[Bombyx_mori]
FPKM:35.61 TPM:27.32
5053 A_BomoASG_c16057_g1_i1
209bp
FPKM:3.94 TPM:3.02
5054 A_BomoASG_c16059_g1_i1
229bp
FPKM:2.27 TPM:1.74
5055 A_BomoASG_c16062_g1_i1
867bp
FPKM:3.81 TPM:2.92
5056 A_BomoASG_c16063_g1_i1
251bp
FPKM:4.77 TPM:3.66
5057 A_BomoASG_c16065_g1_i1
443bp
 phosphatidylinositol_3-kinase_catalytic_subunit_type_3_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000166 F nucleotide binding
GO:0000910 P cytokinesis
GO:0004672 F protein kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006914 P autophagy
GO:0007032 P endosome organization
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0016301 F kinase activity
GO:0016303 F 1-phosphatidylinositol-3-kinase activity
GO:0016310 P phosphorylation
GO:0016485 P protein processing
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030496 C midbody
GO:0031410 C cytoplasmic vesicle
GO:0032465 P regulation of cytokinesis
GO:0035004 F phosphatidylinositol 3-kinase activity
GO:0035032 C phosphatidylinositol 3-kinase complex, class III
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042149 P cellular response to glucose starvation
GO:0043201 P response to leucine
GO:0045022 P early endosome to late endosome transport
GO:0045335 C phagocytic vesicle
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0050708 P regulation of protein secretion
GO:0051301 P cell division
FPKM:2.65 TPM:2.03
5058 A_BomoASG_c16066_g1_i1
445bp
FPKM:2.43 TPM:1.86
5059 A_BomoASG_c16067_g1_i1
252bp
 hypothetical_protein_EAI_10680,_partial_[Harpegnathos_saltator]
FPKM:1.18 TPM:0.91
5060 A_BomoASG_c16068_g1_i1
226bp
FPKM:3.92 TPM:3.00
5061 A_BomoASG_c16069_g1_i1
405bp
FPKM:3.85 TPM:2.95
5062 A_BomoASG_c1606_g1_i1
304bp
FPKM:1.17 TPM:0.90
5063 A_BomoASG_c16070_g1_i1
433bp
FPKM:1.27 TPM:0.97
5064 A_BomoASG_c16071_g1_i1
598bp
FPKM:2.92 TPM:2.24
5065 A_BomoASG_c16073_g1_i1
506bp
 dedicator_of_cytokinesis_protein_9_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0007264 P small GTPase mediated signal transduction
GO:0007596 P blood coagulation
GO:0008150 P biological_process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0043547 P positive regulation of GTPase activity
FPKM:0.14 TPM:0.10
5066 A_BomoASG_c16073_g1_i2
711bp
 dedicator_of_cytokinesis_protein_9_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0007264 P small GTPase mediated signal transduction
GO:0007596 P blood coagulation
GO:0008150 P biological_process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0043547 P positive regulation of GTPase activity
FPKM:3.94 TPM:3.02
5067 A_BomoASG_c16075_g1_i1
324bp
FPKM:6.23 TPM:4.78
5068 A_BomoASG_c16076_g1_i1
366bp
FPKM:3.61 TPM:2.77
5069 A_BomoASG_c16077_g1_i1
562bp
FPKM:6.36 TPM:4.88
5070 A_BomoASG_c16080_g1_i1
259bp
FPKM:5.53 TPM:4.24
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