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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4861 A_BomoASG_c1584_g1_i1
266bp
 PREDICTED:_uncharacterized_protein_LOC106131092_[Amyelois_transitella]
FPKM:1.56 TPM:1.20
4862 A_BomoASG_c15850_g1_i1
349bp
 Tropomyosin_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:0.00 TPM:0.00
4863 A_BomoASG_c15850_g1_i2
459bp
 Tropomyosin_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:2.71 TPM:2.08
4864 A_BomoASG_c15851_g1_i1
305bp
FPKM:8.55 TPM:6.56
4865 A_BomoASG_c15852_g1_i1
478bp
FPKM:7.10 TPM:5.44
4866 A_BomoASG_c15853_g1_i1
1594bp
 alanine--glyoxylate_aminotransferase_2-like_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008453 F alanine-glyoxylate transaminase activity
GO:0008483 F transaminase activity
GO:0016740 F transferase activity
GO:0019544 P arginine catabolic process to glutamate
GO:0030170 F pyridoxal phosphate binding
GO:0035094 P response to nicotine
GO:0042802 F identical protein binding
FPKM:18.53 TPM:14.22
4867 A_BomoASG_c15854_g1_i1
557bp
 THAP_domain-containing_protein_9,_partial_[Camponotus_floridanus]
FPKM:2.20 TPM:1.68
4868 A_BomoASG_c15855_g1_i1
291bp
FPKM:4.71 TPM:3.61
4869 A_BomoASG_c15856_g1_i1
393bp
 zinc_finger_protein_836_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0010629 P negative regulation of gene expression
GO:0032728 P positive regulation of interferon-beta production
GO:0032755 P positive regulation of interleukin-6 production
GO:0032760 P positive regulation of tumor necrosis factor production
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:3.20 TPM:2.46
4870 A_BomoASG_c15857_g1_i1
264bp
FPKM:5.82 TPM:4.47
4871 A_BomoASG_c15858_g1_i1
548bp
FPKM:20.51 TPM:15.73
4872 A_BomoASG_c15859_g1_i1
286bp
hypothetical_protein_O7E_02948,_partial_[Escherichia_coli_O104:H4_str._Ec11-5604]
FPKM:1.77 TPM:1.36
4873 A_BomoASG_c15860_g1_i1
1404bp
 uncharacterized_protein_LOC101741349_isoform_X4_[Bombyx_mori]
FPKM:24.12 TPM:18.50
4874 A_BomoASG_c15860_g1_i2
1327bp
 uncharacterized_protein_LOC101741349_isoform_X2_[Bombyx_mori]
FPKM:3.49 TPM:2.68
4875 A_BomoASG_c15861_g1_i1
487bp
FPKM:3.19 TPM:2.44
4876 A_BomoASG_c15863_g1_i1
488bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:1.77 TPM:1.35
4877 A_BomoASG_c15865_g1_i1
472bp
FPKM:2.78 TPM:2.13
4878 A_BomoASG_c15869_g1_i1
570bp
FPKM:2.13 TPM:1.63
4879 A_BomoASG_c15870_g1_i1
290bp
FPKM:17.23 TPM:13.22
4880 A_BomoASG_c15871_g1_i1
235bp
FPKM:16.21 TPM:12.43
4881 A_BomoASG_c15875_g1_i1
236bp
FPKM:2.09 TPM:1.60
4882 A_BomoASG_c15876_g1_i1
348bp
FPKM:1.52 TPM:1.16
4883 A_BomoASG_c15878_g1_i1
206bp
FPKM:4.13 TPM:3.16
4884 A_BomoASG_c15879_g1_i1
227bp
FPKM:0.77 TPM:0.59
4885 A_BomoASG_c15880_g1_i1
305bp
FPKM:3.89 TPM:2.98
4886 A_BomoASG_c15881_g1_i1
707bp
FPKM:7.90 TPM:6.06
4887 A_BomoASG_c15882_g1_i1
310bp
FPKM:3.01 TPM:2.31
4888 A_BomoASG_c15883_g1_i1
813bp
 proline-rich_extensin-like_protein_EPR1_[Bombyx_mori]
FPKM:25.97 TPM:19.92
4889 A_BomoASG_c15885_g1_i1
323bp
 PREDICTED:_E3_ubiquitin-protein_ligase_RNF185-like_[Plutella_xylostella]
FPKM:1.74 TPM:1.33
4890 A_BomoASG_c15886_g1_i1
232bp
 intraflagellar_transport_protein_80_homolog_[Bombyx_mori]
GO:0001649 P osteoblast differentiation
GO:0002062 P chondrocyte differentiation
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0030992 C intraciliary transport particle B
GO:0035058 P non-motile cilium assembly
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0045880 P positive regulation of smoothened signaling pathway
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0060271 P cilium assembly
GO:0060349 P bone morphogenesis
GO:0072372 C cilium
GO:0097542 C ciliary tip
GO:2000051 P negative regulation of non-canonical Wnt signaling pathway
FPKM:0.73 TPM:0.56
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