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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4771 A_BomoASG_c15751_g1_i1
576bp
FPKM:13.98 TPM:10.72
4772 A_BomoASG_c15753_g1_i1
335bp
 zinc_finger_protein_26_isoform_X2_[Bombyx_mori]
FPKM:4.23 TPM:3.24
4773 A_BomoASG_c15754_g1_i1
484bp
FPKM:1.79 TPM:1.37
4774 A_BomoASG_c15755_g1_i1
239bp
 unnamed_protein_product_[Calliphora_vicina]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.02 TPM:1.55
4775 A_BomoASG_c15756_g1_i1
1099bp
 protein_furry_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008407 P chaeta morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030427 C site of polarized growth
GO:0035316 P non-sensory hair organization
GO:0035317 P imaginal disc-derived wing hair organization
GO:0042052 P rhabdomere development
GO:0044297 C cell body
GO:0045177 C apical part of cell
GO:0045860 P positive regulation of protein kinase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048601 P oocyte morphogenesis
GO:0048800 P antennal morphogenesis
GO:0048814 P regulation of dendrite morphogenesis
GO:0050773 P regulation of dendrite development
GO:0070593 P dendrite self-avoidance
GO:0090527 P actin filament reorganization
FPKM:2.94 TPM:2.25
4776 A_BomoASG_c15757_g1_i1
222bp
FPKM:4.12 TPM:3.16
4777 A_BomoASG_c15758_g1_i1
931bp
 uncharacterized_protein_LOC101741113_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005007 F fibroblast growth factor-activated receptor activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
FPKM:3.42 TPM:2.62
4778 A_BomoASG_c15758_g1_i2
376bp
 uncharacterized_protein_LOC101741113_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4779 A_BomoASG_c1575_g1_i1
286bp
FPKM:6.21 TPM:4.76
4780 A_BomoASG_c15760_g1_i1
385bp
FPKM:0.45 TPM:0.34
4781 A_BomoASG_c15760_g1_i2
516bp
FPKM:2.48 TPM:1.91
4782 A_BomoASG_c15761_g1_i1
484bp
 tropomyosin-2_isoform_X14_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:2.68 TPM:2.06
4783 A_BomoASG_c15762_g1_i1
476bp
 conserved_oligomeric_Golgi_complex_subunit_4-like_[Bombyx_mori]
FPKM:5.13 TPM:3.93
4784 A_BomoASG_c15763_g1_i1
218bp
FPKM:0.00 TPM:0.00
4785 A_BomoASG_c15763_g1_i2
217bp
FPKM:5.28 TPM:4.05
4786 A_BomoASG_c15769_g1_i1
293bp
FPKM:3.37 TPM:2.59
4787 A_BomoASG_c15770_g1_i1
2329bp
 SUMO-activating_enzyme_subunit_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008641 F ubiquitin-like modifier activating enzyme activity
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019948 F SUMO activating enzyme activity
GO:0031510 C SUMO activating enzyme complex
GO:0046872 F metal ion binding
FPKM:35.19 TPM:26.99
4788 A_BomoASG_c15771_g1_i1
548bp
FPKM:4.34 TPM:3.33
4789 A_BomoASG_c15774_g1_i1
2013bp
 WD40_repeat-containing_protein_SMU1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
FPKM:1.45 TPM:1.11
4790 A_BomoASG_c15774_g1_i2
1996bp
 WD40_repeat-containing_protein_SMU1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
FPKM:16.46 TPM:12.62
4791 A_BomoASG_c15777_g1_i1
335bp
 LOW_QUALITY_PROTEIN:_toll-like_receptor_6_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002224 P toll-like receptor signaling pathway
GO:0002237 P response to molecule of bacterial origin
GO:0002376 P immune system process
GO:0002755 P MyD88-dependent toll-like receptor signaling pathway
GO:0004888 F transmembrane signaling receptor activity
GO:0005149 F interleukin-1 receptor binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006954 P inflammatory response
GO:0007165 P signal transduction
GO:0007252 P I-kappaB phosphorylation
GO:0007409 P axonogenesis
GO:0010008 C endosome membrane
GO:0010628 P positive regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016303 F 1-phosphatidylinositol-3-kinase activity
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0030277 P maintenance of gastrointestinal epithelium
GO:0031410 C cytoplasmic vesicle
GO:0032009 C early phagosome
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0032640 P tumor necrosis factor production
GO:0032715 P negative regulation of interleukin-6 production
GO:0032717 P negative regulation of interleukin-8 production
GO:0032722 P positive regulation of chemokine production
GO:0032725 P positive regulation of granulocyte macrophage colony-stimulating factor production
GO:0032728 P positive regulation of interferon-beta production
GO:0032733 P positive regulation of interleukin-10 production
GO:0032735 P positive regulation of interleukin-12 production
GO:0032741 P positive regulation of interleukin-18 production
GO:0032755 P positive regulation of interleukin-6 production
GO:0032757 P positive regulation of interleukin-8 production
GO:0032760 P positive regulation of tumor necrosis factor production
GO:0034122 P negative regulation of toll-like receptor signaling pathway
GO:0034123 P positive regulation of toll-like receptor signaling pathway
GO:0034162 P toll-like receptor 9 signaling pathway
GO:0035197 F siRNA binding
GO:0036020 C endolysosome membrane
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042346 P positive regulation of NIK/NF-kappaB signaling
GO:0042742 P defense response to bacterium
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043507 P positive regulation of JUN kinase activity
GO:0045078 P positive regulation of interferon-gamma production
GO:0045087 P innate immune response
GO:0045335 C phagocytic vesicle
GO:0045356 P positive regulation of interferon-alpha production
GO:0045359 P positive regulation of interferon-beta production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046330 P positive regulation of JNK cascade
GO:0050707 P regulation of cytokine production
GO:0050729 P positive regulation of inflammatory response
GO:0050829 P defense response to Gram-negative bacterium
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0051770 P positive regulation of nitric-oxide synthase biosynthetic process
GO:1901895 P negative regulation of ATPase-coupled calcium transmembrane transporter activity
FPKM:5.53 TPM:4.24
4792 A_BomoASG_c15778_g1_i1
259bp
 regulatory-associated_protein_of_TOR_[Bombyx_mori]
GO:0001030 F RNA polymerase III type 1 promoter sequence-specific DNA binding
GO:0001031 F RNA polymerase III type 2 promoter sequence-specific DNA binding
GO:0001032 F RNA polymerase III type 3 promoter sequence-specific DNA binding
GO:0001156 F TFIIIC-class transcription factor complex binding
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0007050 P regulation of cell cycle
GO:0008361 P regulation of cell size
GO:0016049 P cell growth
GO:0016236 P macroautophagy
GO:0019901 F protein kinase binding
GO:0030425 C dendrite
GO:0031669 P cellular response to nutrient levels
GO:0031929 P TOR signaling
GO:0031931 C TORC1 complex
GO:0032008 P positive regulation of TOR signaling
GO:0032403 F protein-containing complex binding
GO:0042325 P regulation of phosphorylation
GO:0043025 C neuronal cell body
GO:0043231 C intracellular membrane-bounded organelle
GO:0045945 P positive regulation of transcription by RNA polymerase III
GO:0071230 P cellular response to amino acid stimulus
GO:0071889 F 14-3-3 protein binding
GO:0071902 P positive regulation of protein serine/threonine kinase activity
GO:1900034 P regulation of cellular response to heat
FPKM:1.11 TPM:0.85
4793 A_BomoASG_c15781_g1_i1
224bp
FPKM:3.21 TPM:2.46
4794 A_BomoASG_c15782_g1_i1
315bp
FPKM:0.05 TPM:0.04
4795 A_BomoASG_c15782_g1_i2
371bp
FPKM:1.05 TPM:0.81
4796 A_BomoASG_c15783_g1_i1
356bp
FPKM:1.46 TPM:1.12
4797 A_BomoASG_c15783_g1_i2
279bp
FPKM:0.00 TPM:0.00
4798 A_BomoASG_c15784_g1_i1
427bp
FPKM:6.69 TPM:5.13
4799 A_BomoASG_c15785_g1_i1
514bp
 transcription_termination_factor_2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006353 P DNA-templated transcription, termination
GO:0006355 P regulation of transcription, DNA-templated
GO:0007143 P female meiotic nuclear division
GO:0007283 P spermatogenesis
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0016787 F hydrolase activity
GO:0034454 P microtubule anchoring at centrosome
FPKM:2.62 TPM:2.01
4800 A_BomoASG_c15785_g2_i1
547bp
 transcription_termination_factor_2_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006353 P DNA-templated transcription, termination
GO:0006355 P regulation of transcription, DNA-templated
GO:0007143 P female meiotic nuclear division
GO:0007283 P spermatogenesis
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0016787 F hydrolase activity
GO:0034454 P microtubule anchoring at centrosome
FPKM:2.85 TPM:2.19
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