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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4681 A_BomoASG_c15646_g1_i1
912bp
 putative_bel12_ag_transposon_polyprotein_[Operophtera_brumata]
FPKM:1.95 TPM:1.49
4682 A_BomoASG_c15646_g1_i2
303bp
 hypothetical_protein_OBRU01_06171_[Operophtera_brumata]
FPKM:0.00 TPM:0.00
4683 A_BomoASG_c15650_g1_i1
411bp
 PAS_domain-containing_serine/threonine-protein_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0008289 F lipid binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035091 F phosphatidylinositol binding
GO:0043576 P regulation of respiratory gaseous exchange
GO:0045719 P negative regulation of glycogen biosynthetic process
GO:0045727 P positive regulation of translation
GO:0046777 P protein autophosphorylation
GO:0070092 P regulation of glucagon secretion
GO:2000505 P energy homeostasis
FPKM:3.90 TPM:2.99
4684 A_BomoASG_c15651_g1_i1
497bp
FPKM:1.72 TPM:1.32
4685 A_BomoASG_c15654_g1_i1
307bp
FPKM:3.84 TPM:2.94
4686 A_BomoASG_c15655_g1_i1
301bp
FPKM:3.59 TPM:2.76
4687 A_BomoASG_c15655_g2_i1
205bp
FPKM:0.00 TPM:0.00
4688 A_BomoASG_c15657_g1_i1
319bp
FPKM:4.99 TPM:3.83
4689 A_BomoASG_c15658_g1_i1
310bp
 target_of_rapamycin_isoform_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0001030 F RNA polymerase III type 1 promoter sequence-specific DNA binding
GO:0001031 F RNA polymerase III type 2 promoter sequence-specific DNA binding
GO:0001032 F RNA polymerase III type 3 promoter sequence-specific DNA binding
GO:0001156 F TFIIIC-class transcription factor complex binding
GO:0001933 P negative regulation of protein phosphorylation
GO:0001934 P positive regulation of protein phosphorylation
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003007 P heart morphogenesis
GO:0003179 P heart valve morphogenesis
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005942 C phosphatidylinositol 3-kinase complex
GO:0005979 P regulation of glycogen biosynthetic process
GO:0006109 P regulation of carbohydrate metabolic process
GO:0006112 P energy reserve metabolic process
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006281 P DNA repair
GO:0006468 P protein phosphorylation
GO:0006950 P response to stress
GO:0007050 P regulation of cell cycle
GO:0007165 P signal transduction
GO:0007281 P germ cell development
GO:0007420 P brain development
GO:0007569 P cell aging
GO:0007584 P response to nutrient
GO:0007616 P long-term memory
GO:0008144 F obsolete drug binding
GO:0008542 P visual learning
GO:0009791 P post-embryonic development
GO:0010507 P negative regulation of autophagy
GO:0010592 P positive regulation of lamellipodium assembly
GO:0010628 P positive regulation of gene expression
GO:0010831 P positive regulation of myotube differentiation
GO:0010942 P positive regulation of cell death
GO:0010976 P positive regulation of neuron projection development
GO:0012505 C endomembrane system
GO:0014042 P positive regulation of neuron maturation
GO:0014736 P negative regulation of muscle atrophy
GO:0016020 C membrane
GO:0016049 P cell growth
GO:0016236 P macroautophagy
GO:0016242 P negative regulation of macroautophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0019901 F protein kinase binding
GO:0019904 F protein domain specific binding
GO:0021510 P spinal cord development
GO:0030030 P cell projection organization
GO:0030163 P protein catabolic process
GO:0030425 C dendrite
GO:0030838 P positive regulation of actin filament polymerization
GO:0031090 C organelle membrane
GO:0031295 P T cell costimulation
GO:0031397 P negative regulation of protein ubiquitination
GO:0031529 P ruffle organization
GO:0031641 P regulation of myelination
GO:0031669 P cellular response to nutrient levels
GO:0031929 P TOR signaling
GO:0031931 C TORC1 complex
GO:0031932 C TORC2 complex
GO:0031998 P regulation of fatty acid beta-oxidation
GO:0032095 P regulation of response to food
GO:0032868 P response to insulin
GO:0032956 P regulation of actin cytoskeleton organization
GO:0032991 C protein-containing complex
GO:0035176 P social behavior
GO:0035264 P multicellular organism growth
GO:0040007 P growth
GO:0042060 P wound healing
GO:0042220 P response to cocaine
GO:0043022 F ribosome binding
GO:0043025 C neuronal cell body
GO:0043087 P regulation of GTPase activity
GO:0043200 P response to amino acid
GO:0043231 C intracellular membrane-bounded organelle
GO:0043278 P response to morphine
GO:0043610 P regulation of carbohydrate utilization
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0045670 P regulation of osteoclast differentiation
GO:0045727 P positive regulation of translation
GO:0045792 P negative regulation of cell size
GO:0045859 P regulation of protein kinase activity
GO:0045945 P positive regulation of transcription by RNA polymerase III
GO:0046777 P protein autophosphorylation
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0048255 P mRNA stabilization
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0048714 P positive regulation of oligodendrocyte differentiation
GO:0048738 P cardiac muscle tissue development
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0050769 P positive regulation of neurogenesis
GO:0050882 P voluntary musculoskeletal movement
GO:0051219 F phosphoprotein binding
GO:0051496 P positive regulation of stress fiber assembly
GO:0051534 P negative regulation of calcineurin-NFAT signaling cascade
GO:0051896 P regulation of protein kinase B signaling
GO:0051897 P positive regulation of protein kinase B signaling
GO:0055006 P cardiac cell development
GO:0055013 P cardiac muscle cell development
GO:0060048 P cardiac muscle contraction
GO:0060135 P maternal process involved in female pregnancy
GO:0060252 P positive regulation of glial cell proliferation
GO:0060999 P positive regulation of dendritic spine development
GO:0061051 P positive regulation of cell growth involved in cardiac muscle cell development
GO:0071456 P cellular response to hypoxia
GO:0090335 P regulation of brown fat cell differentiation
GO:0090559 P regulation of membrane permeability
GO:1900034 P regulation of cellular response to heat
GO:1901216 P positive regulation of neuron death
GO:1901838 P positive regulation of transcription of nucleolar large rRNA by RNA polymerase I
GO:1904000 P positive regulation of eating behavior
GO:1904056 P positive regulation of cholangiocyte proliferation
GO:1904058 P positive regulation of sensory perception of pain
GO:1904193 P negative regulation of cholangiocyte apoptotic process
GO:1904197 P positive regulation of granulosa cell proliferation
GO:1904206 P positive regulation of skeletal muscle hypertrophy
GO:1904213 P negative regulation of iodide transmembrane transport
FPKM:1.13 TPM:0.87
4690 A_BomoASG_c15658_g2_i1
361bp
 target_of_rapamycin_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001558 P regulation of cell growth
GO:0001934 P positive regulation of protein phosphorylation
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007411 P axon guidance
GO:0007430 P terminal branching, open tracheal system
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0007584 P response to nutrient
GO:0008144 F obsolete drug binding
GO:0008340 P determination of adult lifespan
GO:0008406 P gonad development
GO:0009594 P detection of nutrient
GO:0016242 P negative regulation of macroautophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030307 P positive regulation of cell growth
GO:0031931 C TORC1 complex
GO:0031932 C TORC2 complex
GO:0032456 P endocytic recycling
GO:0035264 P multicellular organism growth
GO:0040007 P growth
GO:0040018 P positive regulation of multicellular organism growth
GO:0042331 P phototaxis
GO:0043621 F protein self-association
GO:0045176 P apical protein localization
GO:0045793 P positive regulation of cell size
GO:0046622 P positive regulation of organ growth
GO:0048142 P germarium-derived cystoblast division
GO:0048813 P dendrite morphogenesis
GO:0051124 P synaptic assembly at neuromuscular junction
GO:0090070 P positive regulation of ribosome biogenesis
GO:2000331 P regulation of terminal button organization
GO:2000377 P regulation of reactive oxygen species metabolic process
GO:2001023 P regulation of response to drug
FPKM:1.14 TPM:0.87
4691 A_BomoASG_c1565_g1_i1
216bp
FPKM:0.89 TPM:0.68
4692 A_BomoASG_c15660_g1_i1
546bp
 polyprotein,_partial_[Bombyx_mori]
FPKM:1.50 TPM:1.15
4693 A_BomoASG_c15661_g1_i1
318bp
 phosphatidylinositol_N-acetylglucosaminyltransferase_subunit_C_[Bombyx_mori]
GO:0000506 C glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
GO:0003824 F catalytic activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0017176 F phosphatidylinositol N-acetylglucosaminyltransferase activity
FPKM:1.08 TPM:0.82
4694 A_BomoASG_c15662_g1_i1
414bp
 PREDICTED:_uncharacterized_protein_LOC105384490_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:2.04 TPM:1.56
4695 A_BomoASG_c15663_g1_i1
522bp
 uncharacterized_protein_LOC101739482_isoform_X6_[Bombyx_mori]
GO:0004112 F cyclic-nucleotide phosphodiesterase activity
GO:0004114 F 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0004115 F 3',5'-cyclic-AMP phosphodiesterase activity
GO:0005622 C intracellular anatomical structure
GO:0006198 P cAMP catabolic process
GO:0007165 P signal transduction
GO:0008081 F phosphoric diester hydrolase activity
GO:0016787 F hydrolase activity
GO:0019933 P cAMP-mediated signaling
GO:0046872 F metal ion binding
FPKM:2.24 TPM:1.72
4696 A_BomoASG_c15663_g2_i1
326bp
 uncharacterized_protein_LOC101739482_isoform_X7_[Bombyx_mori]
FPKM:2.74 TPM:2.10
4697 A_BomoASG_c15664_g1_i1
904bp
 bromodomain_and_WD_repeat-containing_protein_1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007010 P cytoskeleton organization
GO:0008360 P regulation of cell shape
FPKM:0.52 TPM:0.40
4698 A_BomoASG_c15664_g1_i2
931bp
 bromodomain_and_WD_repeat-containing_protein_1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007010 P cytoskeleton organization
GO:0008360 P regulation of cell shape
FPKM:2.53 TPM:1.94
4699 A_BomoASG_c15665_g1_i1
954bp
 protein_grindelwald_[Bombyx_mori]
GO:0005031 F tumor necrosis factor-activated receptor activity
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0046330 P positive regulation of JNK cascade
GO:2001235 P positive regulation of apoptotic signaling pathway
FPKM:64.24 TPM:49.27
4700 A_BomoASG_c15665_g1_i2
984bp
 protein_grindelwald_[Bombyx_mori]
GO:0005031 F tumor necrosis factor-activated receptor activity
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0046330 P positive regulation of JNK cascade
GO:2001235 P positive regulation of apoptotic signaling pathway
FPKM:9.51 TPM:7.29
4701 A_BomoASG_c1566_g1_i1
203bp
FPKM:1.08 TPM:0.83
4702 A_BomoASG_c15670_g1_i1
337bp
FPKM:2.57 TPM:1.97
4703 A_BomoASG_c15671_g1_i1
277bp
FPKM:1.90 TPM:1.46
4704 A_BomoASG_c15672_g1_i1
269bp
FPKM:7.61 TPM:5.83
4705 A_BomoASG_c15673_g1_i1
789bp
 sid-1-related_gene3_precursor_[Bombyx_mori]
FPKM:2.88 TPM:2.21
4706 A_BomoASG_c15675_g1_i1
315bp
FPKM:3.65 TPM:2.80
4707 A_BomoASG_c15676_g1_i1
950bp
FPKM:45.75 TPM:35.09
4708 A_BomoASG_c15677_g1_i1
212bp
FPKM:5.66 TPM:4.34
4709 A_BomoASG_c15679_g1_i1
409bp
FPKM:4.16 TPM:3.19
4710 A_BomoASG_c1567_g1_i1
275bp
 organic_cation_transporter_protein_[Bombyx_mori]
GO:0006810 P transport
GO:0006811 P ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:2.41 TPM:1.85
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