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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4621 A_BomoASG_c15582_g1_i1
369bp
FPKM:5.48 TPM:4.20
4622 A_BomoASG_c15586_g1_i1
206bp
FPKM:13.41 TPM:10.28
4623 A_BomoASG_c15587_g1_i1
209bp
 gag-pol_polyprotein,_partial_[Lasius_niger]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:2.96 TPM:2.27
4624 A_BomoASG_c15588_g1_i1
362bp
 axin_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0007447 P imaginal disc pattern formation
GO:0007455 P eye-antennal disc morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007507 P heart development
GO:0008013 F beta-catenin binding
GO:0010941 P regulation of cell death
GO:0016055 P Wnt signaling pathway
GO:0019901 F protein kinase binding
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0035019 P somatic stem cell population maintenance
GO:0042594 P response to starvation
GO:0043547 P positive regulation of GTPase activity
GO:0048477 P oogenesis
FPKM:3.96 TPM:3.04
4625 A_BomoASG_c15589_g1_i1
223bp
 sprouty-related,_EVH1_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
FPKM:10.57 TPM:8.11
4626 A_BomoASG_c1558_g1_i1
375bp
 uncharacterized_protein_LOC101746589_isoform_X2_[Bombyx_mori]
GO:0002542 P Factor XII activation
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006954 P inflammatory response
GO:0007596 P blood coagulation
GO:0007597 P blood coagulation, intrinsic pathway
GO:0007599 P hemostasis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0022617 P extracellular matrix disassembly
GO:0031638 P zymogen activation
GO:0031639 P plasminogen activation
GO:0042730 P fibrinolysis
GO:0051919 P positive regulation of fibrinolysis
GO:0070062 C extracellular exosome
GO:0097421 P liver regeneration
FPKM:2.13 TPM:1.64
4627 A_BomoASG_c15590_g1_i1
372bp
FPKM:1.62 TPM:1.24
4628 A_BomoASG_c15591_g1_i1
1858bp
 5-aminolevulinate_synthase,_nonspecific,_mitochondrial_[Bombyx_mori]
GO:0001666 P response to hypoxia
GO:0003824 F catalytic activity
GO:0003870 F 5-aminolevulinate synthase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006778 P porphyrin-containing compound metabolic process
GO:0006782 P protoporphyrinogen IX biosynthetic process
GO:0006783 P heme biosynthetic process
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0009635 P response to herbicide
GO:0010033 P response to organic substance
GO:0010045 P response to nickel cation
GO:0014070 P response to organic cyclic compound
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0030170 F pyridoxal phosphate binding
GO:0031667 P response to nutrient levels
GO:0032025 P response to cobalt ion
GO:0032869 P cellular response to insulin stimulus
GO:0033014 P tetrapyrrole biosynthetic process
GO:0034698 P response to gonadotropin
GO:0042493 P response to xenobiotic stimulus
GO:0045471 P response to ethanol
GO:0051591 P response to cAMP
GO:0070541 P response to platinum ion
GO:0071407 P cellular response to organic cyclic compound
FPKM:44.13 TPM:33.85
4629 A_BomoASG_c15594_g1_i1
1591bp
 beta-fructofuranosidase_precursor_[Bombyx_mori]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004564 F beta-fructofuranosidase activity
GO:0004575 F sucrose alpha-glucosidase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0005985 P sucrose metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
FPKM:16.19 TPM:12.42
4630 A_BomoASG_c15595_g1_i1
742bp
 probable_proline--tRNA_ligase,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004827 F proline-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006433 P prolyl-tRNA aminoacylation
GO:0016874 F ligase activity
FPKM:3.11 TPM:2.39
4631 A_BomoASG_c15596_g1_i1
570bp
 SH2B_adapter_protein_1_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0009967 P positive regulation of signal transduction
GO:0016020 C membrane
GO:0030032 P lamellipodium assembly
GO:0035556 P intracellular signal transduction
GO:0035591 F signaling adaptor activity
GO:0045840 P positive regulation of mitotic nuclear division
GO:2000278 P regulation of DNA biosynthetic process
FPKM:3.12 TPM:2.39
4632 A_BomoASG_c15597_g1_i1
749bp
 carboxypeptidase_N_subunit_2_[Bombyx_mori]
GO:0005520 F insulin-like growth factor binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0008022 F protein C-terminus binding
GO:0042567 C insulin-like growth factor ternary complex
GO:0043231 C intracellular membrane-bounded organelle
FPKM:1.34 TPM:1.03
4633 A_BomoASG_c15597_g1_i2
486bp
 carboxypeptidase_N_subunit_2_[Bombyx_mori]
GO:0001968 F fibronectin binding
GO:0004860 F protein kinase inhibitor activity
GO:0005518 F collagen binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019221 P cytokine-mediated signaling pathway
GO:0030335 P positive regulation of cell migration
GO:0043236 F laminin binding
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0046813 P receptor-mediated virion attachment to host cell
GO:0070062 C extracellular exosome
GO:0090005 P negative regulation of protein localization to plasma membrane
FPKM:1.15 TPM:0.88
4634 A_BomoASG_c15598_g1_i1
595bp
FPKM:31.17 TPM:23.91
4635 A_BomoASG_c15599_g1_i1
1229bp
 28S_ribosomal_protein_S29,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005761 C mitochondrial ribosome
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006915 P apoptotic process
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0070125 P mitochondrial translational elongation
GO:0070126 P mitochondrial translational termination
GO:0097190 P apoptotic signaling pathway
FPKM:20.70 TPM:15.88
4636 A_BomoASG_c155_g1_i1
222bp
FPKM:1.65 TPM:1.26
4637 A_BomoASG_c15600_g1_i1
552bp
FPKM:4.15 TPM:3.18
4638 A_BomoASG_c15601_g1_i1
713bp
 uncharacterized_protein_LOC101744487_isoform_X4_[Bombyx_mori]
FPKM:0.32 TPM:0.25
4639 A_BomoASG_c15601_g1_i2
797bp
 uncharacterized_protein_LOC101744487_isoform_X3_[Bombyx_mori]
FPKM:1.55 TPM:1.19
4640 A_BomoASG_c15603_g1_i1
325bp
FPKM:3.09 TPM:2.37
4641 A_BomoASG_c15604_g1_i1
444bp
FPKM:3.86 TPM:2.96
4642 A_BomoASG_c15605_g1_i1
268bp
FPKM:6.14 TPM:4.71
4643 A_BomoASG_c15606_g1_i1
378bp
FPKM:8.15 TPM:6.25
4644 A_BomoASG_c15607_g1_i1
359bp
 tetraspanin-11_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007166 P cell surface receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:1.15 TPM:0.88
4645 A_BomoASG_c15608_g1_i1
382bp
FPKM:2.33 TPM:1.78
4646 A_BomoASG_c15609_g1_i1
273bp
 reverse_transcriptase_[Lasius_niger]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:7.36 TPM:5.64
4647 A_BomoASG_c15610_g1_i1
320bp
 uncharacterized_protein_LOC110386587_[Bombyx_mori]
FPKM:3.19 TPM:2.44
4648 A_BomoASG_c15611_g1_i1
769bp
 myotubularin-related_protein_9_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0030234 F enzyme regulator activity
GO:0050790 P regulation of catalytic activity
FPKM:2.02 TPM:1.55
4649 A_BomoASG_c15612_g1_i1
656bp
FPKM:4.23 TPM:3.25
4650 A_BomoASG_c15613_g1_i1
235bp
FPKM:2.82 TPM:2.16
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