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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4321 A_BomoASG_c1521_g1_i1
237bp
 rna-directed_dna_polymerase_from_mobile_element_jockey-like_protein_[Lasius_niger]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.07 TPM:1.59
4322 A_BomoASG_c15220_g1_i1
434bp
FPKM:2.53 TPM:1.94
4323 A_BomoASG_c15221_g1_i1
794bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_34_[Papilio_xuthus]
GO:0000124 C SAGA complex
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016055 P Wnt signaling pathway
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0071108 P protein K48-linked deubiquitination
GO:0090263 P positive regulation of canonical Wnt signaling pathway
FPKM:4.43 TPM:3.40
4324 A_BomoASG_c15224_g1_i1
250bp
FPKM:4.22 TPM:3.23
4325 A_BomoASG_c15225_g1_i1
244bp
 PREDICTED:_uncharacterized_protein_LOC105381701_[Plutella_xylostella]
FPKM:1.92 TPM:1.47
4326 A_BomoASG_c15226_g1_i1
379bp
FPKM:4.97 TPM:3.82
4327 A_BomoASG_c15227_g1_i1
293bp
FPKM:8.01 TPM:6.15
4328 A_BomoASG_c15228_g1_i1
421bp
FPKM:3.09 TPM:2.37
4329 A_BomoASG_c15229_g1_i1
229bp
FPKM:0.00 TPM:0.00
4330 A_BomoASG_c15229_g1_i2
286bp
FPKM:1.77 TPM:1.36
4331 A_BomoASG_c15231_g1_i1
355bp
 ataxin-2-like_protein_[Bombyx_mori]
FPKM:8.79 TPM:6.74
4332 A_BomoASG_c15232_g1_i1
311bp
FPKM:5.61 TPM:4.30
4333 A_BomoASG_c15232_g2_i1
367bp
FPKM:7.74 TPM:5.94
4334 A_BomoASG_c15234_g1_i1
1824bp
 protein_SGT1_homolog_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000776 C kinetochore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0031647 P regulation of protein stability
GO:0043234 C protein-containing complex
GO:0043947 P obsolete positive regulation by host of symbiont catalytic activity
FPKM:27.58 TPM:21.15
4335 A_BomoASG_c15235_g1_i1
492bp
FPKM:2.09 TPM:1.61
4336 A_BomoASG_c15236_g1_i1
237bp
 hypothetical_protein_BLA29_003839_[Euroglyphus_maynei]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:5.51 TPM:4.23
4337 A_BomoASG_c15237_g1_i1
1800bp
FPKM:21.21 TPM:16.27
4338 A_BomoASG_c15241_g1_i1
290bp
 PREDICTED:_uncharacterized_protein_LOC107882258_[Acyrthosiphon_pisum]
FPKM:3.02 TPM:2.31
4339 A_BomoASG_c15243_g1_i1
348bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
FPKM:3.03 TPM:2.33
4340 A_BomoASG_c15244_g1_i1
306bp
FPKM:1.16 TPM:0.89
4341 A_BomoASG_c15245_g1_i1
767bp
FPKM:2.50 TPM:1.92
4342 A_BomoASG_c15246_g1_i1
565bp
 ecto-nucleotidase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005886 C plasma membrane
GO:0008253 F 5'-nucleotidase activity
GO:0009166 P nucleotide catabolic process
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0031225 C anchored component of membrane
GO:0046872 F metal ion binding
FPKM:1.72 TPM:1.32
4343 A_BomoASG_c15248_g1_i1
208bp
FPKM:5.00 TPM:3.84
4344 A_BomoASG_c15250_g1_i1
273bp
FPKM:6.87 TPM:5.27
4345 A_BomoASG_c15251_g1_i1
352bp
 sterol_regulatory_element-binding_protein_cleavage-activating_protein_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0032933 P SREBP signaling pathway
FPKM:5.35 TPM:4.10
4346 A_BomoASG_c15254_g1_i1
359bp
FPKM:1.15 TPM:0.88
4347 A_BomoASG_c15254_g2_i1
223bp
FPKM:1.63 TPM:1.25
4348 A_BomoASG_c15256_g1_i1
601bp
FPKM:4.88 TPM:3.75
4349 A_BomoASG_c15257_g1_i1
222bp
 facilitated_trehalose_transporter_Tret1-like_[Bombyx_mori]
FPKM:3.30 TPM:2.53
4350 A_BomoASG_c15259_g1_i1
295bp
FPKM:1.25 TPM:0.96
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