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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
331 A_BomoASG_c10466_g1_i1
256bp
FPKM:9.67 TPM:7.42
332 A_BomoASG_c10469_g1_i1
312bp
 uncharacterized_protein_LOC101745471_isoform_X2_[Bombyx_mori]
FPKM:2.97 TPM:2.28
333 A_BomoASG_c1046_g1_i1
578bp
FPKM:1.25 TPM:0.96
334 A_BomoASG_c10470_g1_i1
424bp
FPKM:1.75 TPM:1.34
335 A_BomoASG_c10471_g1_i1
222bp
 PREDICTED:_uncharacterized_protein_LOC105385438_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:4.94 TPM:3.79
336 A_BomoASG_c10472_g1_i1
270bp
FPKM:0.50 TPM:0.39
337 A_BomoASG_c10473_g1_i1
307bp
 Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005634 C nucleus
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.15 TPM:0.88
338 A_BomoASG_c10474_g1_i1
841bp
FPKM:4.30 TPM:3.29
339 A_BomoASG_c10477_g1_i1
375bp
FPKM:4.00 TPM:3.07
340 A_BomoASG_c10478_g1_i1
377bp
FPKM:4.75 TPM:3.65
341 A_BomoASG_c10480_g1_i1
213bp
 ras-related_protein_Ral-a_isoform_X1_[Bombyx_mori]
FPKM:3.72 TPM:2.85
342 A_BomoASG_c10481_g1_i1
1906bp
 cAMP-dependent_protein_kinase_R2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001932 P regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005952 C cAMP-dependent protein kinase complex
GO:0007411 P axon guidance
GO:0007622 P rhythmic behavior
GO:0007623 P circadian rhythm
GO:0008603 F cAMP-dependent protein kinase regulator activity
GO:0030552 F cAMP binding
GO:0045475 P locomotor rhythm
GO:0045859 P regulation of protein kinase activity
GO:0048148 P behavioral response to cocaine
GO:0048149 P behavioral response to ethanol
GO:0048511 P rhythmic process
FPKM:23.73 TPM:18.20
343 A_BomoASG_c10482_g1_i1
231bp
FPKM:2.95 TPM:2.26
344 A_BomoASG_c10484_g1_i1
206bp
hypothetical_protein_GLYMA_13G014500,_partial_[Glycine_max]
FPKM:2.06 TPM:1.58
345 A_BomoASG_c10485_g1_i1
291bp
 uncharacterized_protein_LOC101742950_[Bombyx_mori]
FPKM:3.42 TPM:2.62
346 A_BomoASG_c10490_g1_i1
259bp
 PREDICTED:_fringe_glycosyltransferase_[Papilio_polytes]
FPKM:8.30 TPM:6.37
347 A_BomoASG_c10491_g1_i1
212bp
FPKM:4.72 TPM:3.62
348 A_BomoASG_c10492_g1_i1
246bp
FPKM:1.25 TPM:0.96
349 A_BomoASG_c10495_g1_i1
237bp
 glutamate_receptor-interacting_protein_2_isoform_X5_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0030159 F signaling receptor complex adaptor activity
FPKM:4.14 TPM:3.17
350 A_BomoASG_c10496_g1_i1
206bp
FPKM:3.09 TPM:2.37
351 A_BomoASG_c10499_g1_i1
572bp
FPKM:0.99 TPM:0.76
352 A_BomoASG_c1049_g1_i1
305bp
 uncharacterized_protein_LOC107449773_[Parasteatoda_tepidariorum]
FPKM:0.78 TPM:0.60
353 A_BomoASG_c10500_g1_i1
240bp
 vegetative_cell_wall_protein_gp1-like_isoform_X1_[Bombyx_mori]
FPKM:9.34 TPM:7.16
354 A_BomoASG_c10504_g1_i1
313bp
FPKM:2.59 TPM:1.98
355 A_BomoASG_c10506_g1_i1
217bp
 uncharacterized_protein_LOC101746086_[Bombyx_mori]
FPKM:4.40 TPM:3.37
356 A_BomoASG_c10507_g1_i1
378bp
 PREDICTED:_myosin_light_chain_kinase,_smooth_muscle-like_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0001725 C stress fiber
GO:0002230 P positive regulation of defense response to virus by host
GO:0003779 F actin binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004687 F myosin light chain kinase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005911 C cell-cell junction
GO:0006468 P protein phosphorylation
GO:0006939 P smooth muscle contraction
GO:0014820 P tonic smooth muscle contraction
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019899 F enzyme binding
GO:0030027 C lamellipodium
GO:0030335 P positive regulation of cell migration
GO:0032060 P bleb assembly
GO:0032154 C cleavage furrow
GO:0035690 P cellular response to xenobiotic stimulus
GO:0035865 P cellular response to potassium ion
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0051928 P positive regulation of calcium ion transport
GO:0060414 P aorta smooth muscle tissue morphogenesis
GO:0070062 C extracellular exosome
GO:0071277 P cellular response to calcium ion
GO:0071476 P cellular hypotonic response
GO:0090303 P positive regulation of wound healing
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
FPKM:2.10 TPM:1.61
357 A_BomoASG_c10509_g1_i1
301bp
FPKM:1.20 TPM:0.92
358 A_BomoASG_c1050_g1_i1
317bp
 uncharacterized_LOC101743290_precursor_[Bombyx_mori]
FPKM:1.44 TPM:1.11
359 A_BomoASG_c10511_g1_i1
206bp
FPKM:8.25 TPM:6.33
360 A_BomoASG_c10512_g1_i1
371bp
FPKM:4.89 TPM:3.75
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