SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/58621
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3121 A_BomoASG_c13955_g1_i1
273bp
 LOW_QUALITY_PROTEIN:_protein_CLEC16A_[Bombyx_mori]
FPKM:1.96 TPM:1.51
3122 A_BomoASG_c13956_g1_i1
266bp
 hemocytin_[Bombyx_mori]
GO:0007155 P cell adhesion
GO:0030246 F carbohydrate binding
FPKM:1.56 TPM:1.20
3123 A_BomoASG_c13957_g1_i1
248bp
 beta-1,4-N-acetylgalactosaminyltransferase_bre-4-like_isoform_X3_[Bombyx_mori]
GO:0005975 P carbohydrate metabolic process
GO:0006486 P protein glycosylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0046872 F metal ion binding
FPKM:3.69 TPM:2.83
3124 A_BomoASG_c13958_g1_i1
225bp
FPKM:1.59 TPM:1.22
3125 A_BomoASG_c13959_g1_i1
2717bp
 Carboxypeptidase_N_subunit_2_[Operophtera_brumata]
GO:0005576 C extracellular region
GO:0030234 F enzyme regulator activity
GO:0050790 P regulation of catalytic activity
GO:0050821 P protein stabilization
GO:0070062 C extracellular exosome
GO:0072562 C blood microparticle
FPKM:51.52 TPM:39.52
3126 A_BomoASG_c13959_g1_i2
2609bp
 Carboxypeptidase_N_subunit_2_[Operophtera_brumata]
GO:0005576 C extracellular region
GO:0030234 F enzyme regulator activity
GO:0050790 P regulation of catalytic activity
GO:0050821 P protein stabilization
GO:0070062 C extracellular exosome
GO:0072562 C blood microparticle
FPKM:7.17 TPM:5.50
3127 A_BomoASG_c13961_g1_i1
269bp
 uncharacterized_protein_LOC101745797_[Bombyx_mori]
FPKM:4.56 TPM:3.50
3128 A_BomoASG_c13962_g1_i1
503bp
FPKM:2.87 TPM:2.20
3129 A_BomoASG_c13964_g1_i1
339bp
FPKM:6.68 TPM:5.12
3130 A_BomoASG_c13965_g1_i1
262bp
 pol_protein_[Danaus_plexippus_plexippus]
FPKM:3.77 TPM:2.89
3131 A_BomoASG_c13966_g1_i1
831bp
 probable_Ufm1-specific_protease_1_[Bombyx_mori]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
GO:0071567 F UFM1 hydrolase activity
FPKM:19.44 TPM:14.91
3132 A_BomoASG_c13967_g1_i1
539bp
 putative_OPA3-like_protein_CG13603_[Bombyx_mori]
FPKM:4.44 TPM:3.41
3133 A_BomoASG_c13968_g1_i1
635bp
 hormone_receptor_39,_partial_[Bombyx_mori]
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0003712 F transcription coregulator activity
GO:0004879 F nuclear receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0009755 P hormone-mediated signaling pathway
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030522 P intracellular receptor signaling pathway
GO:0035211 P spermathecum morphogenesis
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0060968 P obsolete regulation of gene silencing
GO:0090575 C RNA polymerase II transcription regulator complex
FPKM:1.84 TPM:1.41
3134 A_BomoASG_c13970_g1_i1
213bp
 uncharacterized_protein_LOC101743782_[Bombyx_mori]
FPKM:1.86 TPM:1.43
3135 A_BomoASG_c13970_g2_i1
437bp
 uncharacterized_protein_LOC101743782_[Bombyx_mori]
FPKM:1.46 TPM:1.12
3136 A_BomoASG_c13971_g1_i1
452bp
FPKM:3.56 TPM:2.73
3137 A_BomoASG_c13972_g1_i1
236bp
FPKM:3.48 TPM:2.67
3138 A_BomoASG_c13973_g1_i1
221bp
FPKM:11.68 TPM:8.96
3139 A_BomoASG_c13974_g1_i1
797bp
FPKM:13.68 TPM:10.49
3140 A_BomoASG_c13975_g1_i1
304bp
FPKM:0.39 TPM:0.30
3141 A_BomoASG_c13976_g1_i1
710bp
FPKM:2.23 TPM:1.71
3142 A_BomoASG_c13977_g1_i1
811bp
FPKM:2.96 TPM:2.27
3143 A_BomoASG_c13979_g1_i1
471bp
FPKM:0.91 TPM:0.70
3144 A_BomoASG_c13979_g1_i2
489bp
FPKM:1.60 TPM:1.23
3145 A_BomoASG_c13981_g1_i1
454bp
FPKM:2.36 TPM:1.81
3146 A_BomoASG_c13983_g1_i1
397bp
 Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
FPKM:1.45 TPM:1.12
3147 A_BomoASG_c13984_g1_i1
489bp
 sodium-independent_sulfate_anion_transporter_isoform_X5_[Bombyx_mori]
FPKM:1.60 TPM:1.23
3148 A_BomoASG_c13984_g1_i2
715bp
 sodium-independent_sulfate_anion_transporter_isoform_X5_[Bombyx_mori]
FPKM:1.78 TPM:1.36
3149 A_BomoASG_c13985_g1_i1
458bp
FPKM:2.33 TPM:1.78
3150 A_BomoASG_c13986_g1_i1
504bp
FPKM:2.19 TPM:1.68
previous next from show/58621

- SilkBase 1999-2023 -