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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3031 A_BomoASG_c13850_g1_i1
855bp
FPKM:4.80 TPM:3.68
3032 A_BomoASG_c13851_g1_i1
270bp
FPKM:3.02 TPM:2.31
3033 A_BomoASG_c13851_g1_i2
259bp
FPKM:0.00 TPM:0.00
3034 A_BomoASG_c13853_g1_i1
366bp
 E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
FPKM:5.28 TPM:4.05
3035 A_BomoASG_c13855_g1_i1
211bp
FPKM:18.18 TPM:13.95
3036 A_BomoASG_c13857_g1_i1
511bp
FPKM:7.10 TPM:5.45
3037 A_BomoASG_c13858_g1_i1
235bp
 atlastin_[Bombyx_mori]
GO:0000137 C Golgi cis cisterna
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0007029 P endoplasmic reticulum organization
GO:0007409 P axonogenesis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0030424 C axon
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0051260 P protein homooligomerization
FPKM:1.41 TPM:1.08
3038 A_BomoASG_c1385_g1_i1
264bp
FPKM:2.12 TPM:1.62
3039 A_BomoASG_c13861_g1_i1
338bp
FPKM:1.28 TPM:0.98
3040 A_BomoASG_c13862_g1_i1
201bp
FPKM:12.28 TPM:9.42
3041 A_BomoASG_c13863_g1_i1
376bp
FPKM:6.10 TPM:4.68
3042 A_BomoASG_c13865_g1_i1
856bp
 cytochrome_b5_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:16.56 TPM:12.70
3043 A_BomoASG_c13866_g1_i1
1735bp
 phosphoglyceromutase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004082 F bisphosphoglycerate mutase activity
GO:0004083 F bisphosphoglycerate 2-phosphatase activity
GO:0004619 F phosphoglycerate mutase activity
GO:0005829 C cytosol
GO:0006094 P gluconeogenesis
GO:0006096 P glycolytic process
GO:0008152 P metabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016853 F isomerase activity
GO:0016868 F intramolecular transferase activity, phosphotransferases
GO:0043209 C myelin sheath
GO:0043456 P regulation of pentose-phosphate shunt
GO:0046538 F 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
FPKM:243.46 TPM:186.74
3044 A_BomoASG_c13867_g1_i1
488bp
FPKM:4.06 TPM:3.11
3045 A_BomoASG_c13869_g1_i1
510bp
FPKM:4.58 TPM:3.51
3046 A_BomoASG_c1386_g1_i1
205bp
FPKM:4.19 TPM:3.21
3047 A_BomoASG_c13870_g1_i1
272bp
 zinc_finger_protein_260_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
FPKM:2.97 TPM:2.28
3048 A_BomoASG_c13871_g1_i1
822bp
FPKM:2.12 TPM:1.63
3049 A_BomoASG_c13873_g1_i1
273bp
FPKM:0.49 TPM:0.38
3050 A_BomoASG_c13874_g1_i1
431bp
 C2_domain-containing_protein_5_isoform_X3_[Bombyx_mori]
GO:0001726 C ruffle
GO:0005509 F calcium ion binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006810 P transport
GO:0006906 P vesicle fusion
GO:0008289 F lipid binding
GO:0010828 P positive regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031340 P positive regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0032587 C ruffle membrane
GO:0032869 P cellular response to insulin stimulus
GO:0038028 P insulin receptor signaling pathway via phosphatidylinositol 3-kinase
GO:0042995 C cell projection
GO:0065002 P intracellular protein transmembrane transport
GO:0072659 P protein localization to plasma membrane
GO:0090314 P positive regulation of protein targeting to membrane
GO:2001275 P obsolete positive regulation of glucose import in response to insulin stimulus
FPKM:2.34 TPM:1.80
3051 A_BomoASG_c13875_g1_i1
394bp
FPKM:1.23 TPM:0.94
3052 A_BomoASG_c13875_g2_i1
458bp
FPKM:3.49 TPM:2.68
3053 A_BomoASG_c13876_g1_i1
797bp
FPKM:4.68 TPM:3.59
3054 A_BomoASG_c13877_g1_i1
330bp
 uncharacterized_protein_LOC101740831_isoform_X2_[Bombyx_mori]
FPKM:3.01 TPM:2.31
3055 A_BomoASG_c1387_g1_i1
256bp
FPKM:4.55 TPM:3.49
3056 A_BomoASG_c13880_g1_i1
267bp
FPKM:3.09 TPM:2.37
3057 A_BomoASG_c13881_g1_i1
610bp
 zinc_finger_protein_43-like_[Helicoverpa_armigera]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048863 P stem cell differentiation
FPKM:3.88 TPM:2.98
3058 A_BomoASG_c13882_g1_i1
422bp
 PREDICTED:_uncharacterized_protein_LOC105389720_[Plutella_xylostella]
FPKM:1.98 TPM:1.52
3059 A_BomoASG_c13884_g1_i1
201bp
hypothetical_protein_NITMOv2_1361_[Nitrospira_moscoviensis]
FPKM:0.00 TPM:0.00
3060 A_BomoASG_c13885_g1_i1
537bp
 uncharacterized_protein_LOC101742795_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0035303 P regulation of dephosphorylation
GO:0042162 F telomeric DNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0051721 F protein phosphatase 2A binding
FPKM:3.70 TPM:2.83
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