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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2911 A_BomoASG_c13709_g2_i1
232bp
FPKM:1.46 TPM:1.12
2912 A_BomoASG_c1370_g1_i1
286bp
FPKM:2.22 TPM:1.70
2913 A_BomoASG_c13710_g1_i1
557bp
 probable_ATP-dependent_RNA_helicase_pitchoune_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008283 P cell population proliferation
GO:0010501 P RNA secondary structure unwinding
GO:0016049 P cell growth
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
FPKM:4.39 TPM:3.37
2914 A_BomoASG_c13711_g1_i1
360bp
 ionotropic_receptor_93a_[Bombyx_mori]
FPKM:4.29 TPM:3.29
2915 A_BomoASG_c13712_g1_i1
575bp
FPKM:6.59 TPM:5.05
2916 A_BomoASG_c13713_g1_i1
658bp
 mitochondrial_28S_ribosomal_protein_S14_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
FPKM:39.92 TPM:30.62
2917 A_BomoASG_c13714_g1_i1
988bp
 mitoguardin_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0008053 P mitochondrial fusion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:2.76 TPM:2.12
2918 A_BomoASG_c13715_g1_i1
406bp
FPKM:3.51 TPM:2.69
2919 A_BomoASG_c13719_g1_i1
207bp
FPKM:6.09 TPM:4.67
2920 A_BomoASG_c1371_g1_i1
363bp
FPKM:0.85 TPM:0.65
2921 A_BomoASG_c13720_g1_i1
559bp
FPKM:5.39 TPM:4.13
2922 A_BomoASG_c13721_g1_i1
410bp
FPKM:1.38 TPM:1.06
2923 A_BomoASG_c13721_g1_i2
223bp
FPKM:0.00 TPM:0.00
2924 A_BomoASG_c13722_g1_i1
400bp
FPKM:6.71 TPM:5.14
2925 A_BomoASG_c13724_g1_i1
437bp
FPKM:1.44 TPM:1.10
2926 A_BomoASG_c13726_g1_i1
1135bp
 28S_ribosomal_protein_S35,_mitochondrial_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0030529 C ribonucleoprotein complex
GO:0042769 P obsolete DNA damage response, detection of DNA damage
GO:0044822 F RNA binding
GO:0070125 P mitochondrial translational elongation
GO:0070126 P mitochondrial translational termination
FPKM:34.18 TPM:26.22
2927 A_BomoASG_c13728_g1_i1
508bp
FPKM:2.33 TPM:1.79
2928 A_BomoASG_c13729_g1_i1
733bp
 Uncharacterized_protein_OBRU01_17125_[Operophtera_brumata]
FPKM:17.53 TPM:13.45
2929 A_BomoASG_c1372_g1_i1
306bp
 zwei_Ig_domain_protein_zig-8_[Bombyx_mori]
FPKM:1.55 TPM:1.19
2930 A_BomoASG_c13730_g1_i1
504bp
 uncharacterized_protein_LOC101740292_[Bombyx_mori]
FPKM:7.92 TPM:6.07
2931 A_BomoASG_c13732_g1_i1
541bp
 LOW_QUALITY_PROTEIN:_protein_sidekick_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042675 P compound eye cone cell differentiation
GO:0046533 P negative regulation of photoreceptor cell differentiation
GO:0050931 P pigment cell differentiation
GO:0098595 C perivitelline space
FPKM:3.20 TPM:2.45
2932 A_BomoASG_c13734_g1_i1
331bp
FPKM:2.66 TPM:2.04
2933 A_BomoASG_c13734_g1_i2
215bp
FPKM:0.00 TPM:0.00
2934 A_BomoASG_c13735_g1_i1
288bp
FPKM:7.87 TPM:6.04
2935 A_BomoASG_c13736_g1_i1
262bp
FPKM:0.54 TPM:0.41
2936 A_BomoASG_c13737_g1_i1
806bp
 signal_recognition_particle_14_kDa_protein-like_protein_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005786 C signal recognition particle, endoplasmic reticulum targeting
GO:0006614 P SRP-dependent cotranslational protein targeting to membrane
GO:0008312 F 7S RNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030942 F endoplasmic reticulum signal peptide binding
GO:0042493 P response to xenobiotic stimulus
GO:0044822 F RNA binding
GO:0045047 P protein targeting to ER
GO:0048500 C signal recognition particle
GO:0070062 C extracellular exosome
FPKM:19.46 TPM:14.93
2937 A_BomoASG_c13738_g1_i1
252bp
FPKM:2.36 TPM:1.81
2938 A_BomoASG_c13738_g2_i1
218bp
FPKM:3.47 TPM:2.66
2939 A_BomoASG_c13739_g1_i1
427bp
FPKM:4.10 TPM:3.15
2940 A_BomoASG_c13740_g1_i1
234bp
 teneurin-a_isoform_X4_[Bombyx_mori]
FPKM:2.14 TPM:1.64
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