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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
241 A_BomoASG_c10345_g1_i1
205bp
FPKM:5.24 TPM:4.02
242 A_BomoASG_c10352_g1_i1
672bp
FPKM:18.34 TPM:14.07
243 A_BomoASG_c10354_g1_i1
246bp
FPKM:1.88 TPM:1.44
244 A_BomoASG_c10355_g1_i1
250bp
FPKM:3.61 TPM:2.77
245 A_BomoASG_c10357_g1_i1
323bp
FPKM:2.09 TPM:1.60
246 A_BomoASG_c10359_g1_i1
298bp
 PREDICTED:_USP6_N-terminal-like_protein_isoform_X3_[Papilio_xuthus]
GO:0005096 F GTPase activator activity
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0007030 P Golgi organization
GO:0012505 C endomembrane system
GO:0016023 C cytoplasmic vesicle
GO:0017137 F small GTPase binding
GO:0019068 P virion assembly
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0032588 C trans-Golgi network membrane
GO:0035526 P retrograde transport, plasma membrane to Golgi
GO:0048227 P plasma membrane to endosome transport
GO:0090630 P activation of GTPase activity
GO:1902017 P regulation of cilium assembly
GO:1903358 P regulation of Golgi organization
FPKM:3.26 TPM:2.50
247 A_BomoASG_c10360_g1_i1
448bp
FPKM:3.21 TPM:2.46
248 A_BomoASG_c10360_g1_i2
335bp
FPKM:0.00 TPM:0.00
249 A_BomoASG_c10361_g1_i1
349bp
FPKM:1.51 TPM:1.16
250 A_BomoASG_c10362_g1_i1
415bp
FPKM:2.48 TPM:1.91
251 A_BomoASG_c10363_g1_i1
225bp
FPKM:7.14 TPM:5.48
252 A_BomoASG_c10364_g1_i1
255bp
FPKM:2.87 TPM:2.20
253 A_BomoASG_c10365_g1_i1
210bp
FPKM:3.88 TPM:2.98
254 A_BomoASG_c10366_g1_i1
295bp
FPKM:3.33 TPM:2.55
255 A_BomoASG_c10367_g1_i1
941bp
 ribulose-phosphate_3-epimerase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004750 F D-ribulose-phosphate 3-epimerase activity
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006098 P pentose-phosphate shunt
GO:0008152 P metabolic process
GO:0009052 P pentose-phosphate shunt, non-oxidative branch
GO:0016853 F isomerase activity
GO:0016857 F racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0019323 P pentose catabolic process
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044262 P cellular carbohydrate metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
FPKM:50.78 TPM:38.95
256 A_BomoASG_c1036_g1_i1
234bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.56 TPM:2.73
257 A_BomoASG_c10371_g1_i1
372bp
FPKM:5.40 TPM:4.14
258 A_BomoASG_c10372_g1_i1
208bp
FPKM:6.00 TPM:4.60
259 A_BomoASG_c10373_g1_i1
1897bp
 DDB1-_and_CUL4-associated_factor_7_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0016363 C nuclear matrix
GO:0016567 P protein ubiquitination
GO:0043234 C protein-containing complex
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
FPKM:29.95 TPM:22.97
260 A_BomoASG_c10374_g1_i1
290bp
 gamma-tubulin_complex_component_6_[Helicoverpa_armigera]
FPKM:1.72 TPM:1.32
261 A_BomoASG_c10375_g1_i1
364bp
FPKM:0.00 TPM:0.00
262 A_BomoASG_c10376_g1_i1
285bp
 uncharacterized_protein_LOC110385079_[Bombyx_mori]
FPKM:4.92 TPM:3.77
263 A_BomoASG_c10378_g1_i1
212bp
FPKM:2.83 TPM:2.17
264 A_BomoASG_c10379_g1_i1
320bp
FPKM:1.42 TPM:1.09
265 A_BomoASG_c1037_g1_i1
244bp
FPKM:2.56 TPM:1.96
266 A_BomoASG_c10380_g1_i1
247bp
 uncharacterized_protein_LOC105842629_[Bombyx_mori]
FPKM:3.10 TPM:2.38
267 A_BomoASG_c10381_g1_i1
202bp
hypothetical_protein_[Escherichia_coli]
FPKM:1.10 TPM:0.84
268 A_BomoASG_c10383_g1_i1
237bp
FPKM:6.20 TPM:4.76
269 A_BomoASG_c10384_g1_i1
391bp
 solute_carrier_family_2,_facilitated_glucose_transporter_member_1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0034219 P carbohydrate transmembrane transport
GO:0051119 F sugar transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:3.98 TPM:3.05
270 A_BomoASG_c10387_g1_i1
428bp
 uncharacterized_protein_LOC101746443_[Bombyx_mori]
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005856 C cytoskeleton
GO:0008289 F lipid binding
GO:0042995 C cell projection
GO:0043197 C dendritic spine
GO:0051835 P positive regulation of synapse structural plasticity
FPKM:2.37 TPM:1.81
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