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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2401 A_BomoASG_c13155_g1_i1
475bp
 PREDICTED:_axin_[Papilio_machaon]
FPKM:6.43 TPM:4.93
2402 A_BomoASG_c13156_g1_i1
408bp
FPKM:1.86 TPM:1.42
2403 A_BomoASG_c13157_g1_i1
3648bp
 uncharacterized_protein_LOC101737292_[Bombyx_mori]
FPKM:25.10 TPM:19.25
2404 A_BomoASG_c13158_g1_i1
1192bp
 serine/threonine-protein_kinase_Genghis_Khan_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0006468 P protein phosphorylation
GO:0008039 P synaptic target recognition
GO:0008064 P regulation of actin polymerization or depolymerization
GO:0008154 P actin polymerization or depolymerization
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030424 C axon
GO:0030426 C growth cone
GO:0030833 P regulation of actin filament polymerization
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
FPKM:2.79 TPM:2.14
2405 A_BomoASG_c13159_g1_i1
2649bp
 phospholipase_A-2-activating_protein_[Bombyx_mori]
GO:0005515 F protein binding
GO:0006644 P phospholipid metabolic process
GO:0006954 P inflammatory response
GO:0007165 P signal transduction
GO:0016005 F phospholipase A2 activator activity
GO:0043085 P positive regulation of catalytic activity
GO:0070062 C extracellular exosome
FPKM:30.32 TPM:23.26
2406 A_BomoASG_c1315_g1_i1
247bp
FPKM:1.86 TPM:1.43
2407 A_BomoASG_c13160_g1_i1
259bp
FPKM:1.11 TPM:0.85
2408 A_BomoASG_c13161_g1_i1
225bp
 uncharacterized_protein_LOC101738890_[Bombyx_mori]
FPKM:6.35 TPM:4.87
2409 A_BomoASG_c13163_g1_i1
444bp
FPKM:7.75 TPM:5.95
2410 A_BomoASG_c13164_g1_i1
802bp
 uncharacterized_protein_LOC110386244_[Bombyx_mori]
FPKM:2.82 TPM:2.17
2411 A_BomoASG_c13165_g1_i1
1929bp
 tubulin-specific_chaperone_D_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005923 C bicellular tight junction
GO:0006457 P protein folding
GO:0007021 P tubulin complex assembly
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0010812 P negative regulation of cell-substrate adhesion
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0031115 P negative regulation of microtubule polymerization
GO:0034333 P adherens junction assembly
GO:0043547 P positive regulation of GTPase activity
GO:0048487 F beta-tubulin binding
GO:0070830 P bicellular tight junction assembly
FPKM:25.85 TPM:19.83
2412 A_BomoASG_c13166_g1_i1
509bp
 PREDICTED:_RING-box_protein_2_[Papilio_xuthus]
GO:0005507 F copper ion binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0019788 F NEDD8 transferase activity
GO:0031146 P SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031463 C Cul3-RING ubiquitin ligase complex
GO:0031466 C Cul5-RING ubiquitin ligase complex
GO:0031467 C Cul7-RING ubiquitin ligase complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043224 C nuclear SCF ubiquitin ligase complex
GO:0045116 P protein neddylation
GO:0046872 F metal ion binding
GO:0051775 P response to redox state
GO:0061630 F ubiquitin protein ligase activity
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:0097602 F cullin family protein binding
FPKM:33.89 TPM:25.99
2413 A_BomoASG_c13167_g1_i1
214bp
FPKM:0.00 TPM:0.00
2414 A_BomoASG_c13168_g1_i1
715bp
 lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_isoform_X1_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
FPKM:113.18 TPM:86.81
2415 A_BomoASG_c13169_g1_i1
219bp
 tyrosine-protein_phosphatase_69D_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004728 F obsolete signal transducer, downstream of receptor, with protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007415 P defasciculation of motor neuron axon
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0023014 P signal transduction
GO:0030424 C axon
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
GO:0097155 P fasciculation of sensory neuron axon
FPKM:1.71 TPM:1.31
2416 A_BomoASG_c13169_g1_i2
419bp
 tyrosine-protein_phosphatase_69D_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042675 P compound eye cone cell differentiation
GO:0046533 P negative regulation of photoreceptor cell differentiation
GO:0050931 P pigment cell differentiation
GO:0098595 C perivitelline space
FPKM:3.56 TPM:2.73
2417 A_BomoASG_c1316_g1_i1
225bp
FPKM:1.59 TPM:1.22
2418 A_BomoASG_c13170_g1_i1
1632bp
 protein_HGH1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:36.21 TPM:27.77
2419 A_BomoASG_c13171_g1_i1
1431bp
FPKM:47.41 TPM:36.37
2420 A_BomoASG_c13174_g1_i1
267bp
 E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
GO:0005516 F calmodulin binding
GO:0007275 P multicellular organism development
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0007399 P nervous system development
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0030154 P cell differentiation
GO:0042065 P glial cell growth
GO:0042066 P perineurial glial growth
GO:0043186 C P granule
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
FPKM:2.09 TPM:1.60
2421 A_BomoASG_c13174_g1_i2
933bp
 E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
GO:0005516 F calmodulin binding
GO:0007275 P multicellular organism development
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0007399 P nervous system development
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0030154 P cell differentiation
GO:0042065 P glial cell growth
GO:0042066 P perineurial glial growth
GO:0043186 C P granule
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
FPKM:4.47 TPM:3.43
2422 A_BomoASG_c13176_g1_i1
1338bp
 cAMP-dependent_protein_kinase_R1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001932 P regulation of protein phosphorylation
GO:0005952 C cAMP-dependent protein kinase complex
GO:0007015 P actin filament organization
GO:0007274 P neuromuscular synaptic transmission
GO:0007419 P ventral cord development
GO:0007591 P molting cycle, chitin-based cuticle
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008355 P olfactory learning
GO:0008603 F cAMP-dependent protein kinase regulator activity
GO:0019933 P cAMP-mediated signaling
GO:0030551 F cyclic nucleotide binding
GO:0030552 F cAMP binding
GO:0045471 P response to ethanol
GO:0045859 P regulation of protein kinase activity
GO:2000253 P positive regulation of feeding behavior
FPKM:20.00 TPM:15.34
2423 A_BomoASG_c13177_g1_i1
254bp
 hypothetical_protein_LOTGIDRAFT_141913,_partial_[Lottia_gigantea]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.16 TPM:0.89
2424 A_BomoASG_c13178_g1_i1
956bp
FPKM:35.11 TPM:26.93
2425 A_BomoASG_c13179_g1_i1
202bp
FPKM:0.00 TPM:0.00
2426 A_BomoASG_c13179_g1_i2
478bp
FPKM:3.64 TPM:2.79
2427 A_BomoASG_c13181_g1_i1
267bp
FPKM:4.13 TPM:3.16
2428 A_BomoASG_c13182_g1_i1
203bp
FPKM:2.16 TPM:1.66
2429 A_BomoASG_c13183_g1_i1
310bp
FPKM:1.51 TPM:1.16
2430 A_BomoASG_c13184_g1_i1
585bp
 protein_disks_lost_[Bombyx_mori]
FPKM:5.47 TPM:4.20
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