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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1861 A_BomoASG_c12562_g1_i1
2866bp
 GMP_synthase_[glutamine-hydrolyzing]_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003921 F GMP synthase activity
GO:0003922 F GMP synthase (glutamine-hydrolyzing) activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006164 P purine nucleotide biosynthetic process
GO:0006177 P GMP biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0009113 P purine nucleobase biosynthetic process
GO:0009168 P purine ribonucleoside monophosphate biosynthetic process
GO:0016462 F pyrophosphatase activity
GO:0016874 F ligase activity
FPKM:39.61 TPM:30.38
1862 A_BomoASG_c12563_g1_i1
559bp
 putative_pol_protein_[Danaus_plexippus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:3.35 TPM:2.57
1863 A_BomoASG_c12564_g1_i1
658bp
 TELO2-interacting_protein_1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0031931 C TORC1 complex
GO:0031932 C TORC2 complex
GO:0032006 P regulation of TOR signaling
FPKM:4.92 TPM:3.77
1864 A_BomoASG_c12566_g1_i1
1138bp
 peptidylprolyl_isomerase_B_precursor_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005925 C focal adhesion
GO:0006457 P protein folding
GO:0016020 C membrane
GO:0016853 F isomerase activity
GO:0032403 F protein-containing complex binding
GO:0032991 C protein-containing complex
GO:0034663 C endoplasmic reticulum chaperone complex
GO:0040018 P positive regulation of multicellular organism growth
GO:0042277 F peptide binding
GO:0042470 C melanosome
GO:0044794 P positive regulation by host of viral process
GO:0044822 F RNA binding
GO:0044829 P positive regulation by host of viral genome replication
GO:0048471 C perinuclear region of cytoplasm
GO:0050821 P protein stabilization
GO:0060348 P bone development
GO:0061077 P chaperone-mediated protein folding
GO:0070062 C extracellular exosome
GO:0070063 F RNA polymerase binding
FPKM:312.58 TPM:239.76
1865 A_BomoASG_c12569_g1_i1
204bp
 polyprotein,_partial_[Bombyx_mori]
FPKM:4.26 TPM:3.26
1866 A_BomoASG_c1256_g1_i1
328bp
FPKM:2.70 TPM:2.07
1867 A_BomoASG_c12570_g1_i1
219bp
 PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Amyelois_transitella]
FPKM:3.43 TPM:2.63
1868 A_BomoASG_c12572_g1_i1
485bp
 PREDICTED:_uncharacterized_protein_LOC105206703,_partial_[Solenopsis_invicta]
FPKM:1.96 TPM:1.50
1869 A_BomoASG_c12573_g1_i1
493bp
FPKM:43.80 TPM:33.60
1870 A_BomoASG_c12574_g1_i1
277bp
FPKM:0.95 TPM:0.73
1871 A_BomoASG_c12575_g1_i1
435bp
FPKM:1.68 TPM:1.29
1872 A_BomoASG_c12577_g1_i1
852bp
 PREDICTED:_single-stranded_DNA-binding_protein_3_isoform_X2_[Amyelois_transitella]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006461 P protein-containing complex assembly
GO:0008284 P positive regulation of cell population proliferation
GO:0021501 P prechordal plate formation
GO:0021547 P midbrain-hindbrain boundary initiation
GO:0043234 C protein-containing complex
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0060322 P head development
GO:0060323 P head morphogenesis
GO:2000744 P positive regulation of anterior head development
FPKM:20.55 TPM:15.76
1873 A_BomoASG_c12578_g1_i1
271bp
FPKM:3.49 TPM:2.68
1874 A_BomoASG_c12579_g1_i1
276bp
FPKM:3.83 TPM:2.94
1875 A_BomoASG_c1257_g1_i1
267bp
FPKM:6.19 TPM:4.75
1876 A_BomoASG_c12580_g1_i1
1064bp
 autophagy-related_protein_16-1_isoform_X2_[Helicoverpa_armigera]
GO:0000045 P autophagosome assembly
GO:0000421 C autophagosome membrane
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0034045 C phagophore assembly site membrane
GO:0039689 P negative stranded viral RNA replication
FPKM:1.49 TPM:1.14
1877 A_BomoASG_c12581_g1_i1
230bp
 protein_Lilipod_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:3.73 TPM:2.86
1878 A_BomoASG_c12582_g1_i1
247bp
hypothetical_protein_H702_00110_[Streptococcus_equinus_JB1]
FPKM:4.34 TPM:3.33
1879 A_BomoASG_c12584_g1_i1
254bp
FPKM:0.00 TPM:0.00
1880 A_BomoASG_c12584_g2_i1
287bp
FPKM:3.52 TPM:2.70
1881 A_BomoASG_c12586_g1_i1
408bp
FPKM:12.06 TPM:9.25
1882 A_BomoASG_c12587_g1_i1
536bp
 E3_ubiquitin-protein_ligase_MYCBP2_isoform_X1_[Bombyx_mori]
FPKM:1.70 TPM:1.30
1883 A_BomoASG_c1258_g1_i1
256bp
 NADH-ubiquinone_oxidoreductase_49_kDa_subunit_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003954 F NADH dehydrogenase activity
GO:0005575 C cellular_component
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005747 C mitochondrial respiratory chain complex I
GO:0006979 P response to oxidative stress
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016651 F oxidoreductase activity, acting on NAD(P)H
GO:0031625 F ubiquitin protein ligase binding
GO:0046872 F metal ion binding
GO:0048038 F quinone binding
GO:0051287 F NAD binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:2.27 TPM:1.74
1884 A_BomoASG_c12592_g1_i1
209bp
FPKM:0.99 TPM:0.76
1885 A_BomoASG_c12593_g1_i1
445bp
FPKM:4.46 TPM:3.42
1886 A_BomoASG_c12594_g1_i1
202bp
FPKM:2.20 TPM:1.69
1887 A_BomoASG_c12596_g1_i1
244bp
FPKM:1.92 TPM:1.47
1888 A_BomoASG_c12597_g1_i1
213bp
 uncharacterized_protein_LOC101738833_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1889 A_BomoASG_c12597_g1_i2
372bp
 uncharacterized_protein_LOC101738833_[Bombyx_mori]
FPKM:8.65 TPM:6.63
1890 A_BomoASG_c12598_g1_i1
566bp
 titin_homolog_[Bombyx_mori]
FPKM:5.15 TPM:3.95
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