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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
31 A_TrvaFAMAMG_TR10027c0_g1_i1
1321bp
FPKM:14.60 TPM:14.31
32 A_TrvaFAMAMG_TR10028c0_g1_i1
730bp
FPKM:1.46 TPM:1.43
33 A_TrvaFAMAMG_TR10029c0_g1_i1
368bp
FPKM:3.23 TPM:3.16
34 A_TrvaFAMAMG_TR1002c0_g1_i1
254bp
FPKM:0.56 TPM:0.55
35 A_TrvaFAMAMG_TR10030c0_g1_i1
637bp
hypothetical_protein_BURPS1655_C0449_[Burkholderia_pseudomallei_1655]
FPKM:0.84 TPM:0.83
36 A_TrvaFAMAMG_TR10031c0_g1_i1
519bp
type_I_glyceraldehyde-3-phosphate_dehydrogenase_[Olsenella_sp._SIT9]
FPKM:13.56 TPM:13.29
37 A_TrvaFAMAMG_TR10032c0_g1_i1
368bp
pyruvate_carboxylase_subunit_A_[Streptomyces_acidiscabies]
FPKM:0.58 TPM:0.57
38 A_TrvaFAMAMG_TR10033c0_g1_i1
423bp
chitinase_isoform_1_precursor_[Bombyx_mori]
GO:0000272 P polysaccharide catabolic process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0006030 P chitin metabolic process
GO:0006032 P chitin catabolic process
GO:0008061 F chitin binding
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
FPKM:0.67 TPM:0.66
39 A_TrvaFAMAMG_TR10034c0_g1_i1
370bp
FPKM:0.00 TPM:0.00
40 A_TrvaFAMAMG_TR10034c0_g2_i1
377bp
FPKM:0.86 TPM:0.84
41 A_TrvaFAMAMG_TR10034c0_g3_i1
352bp
FPKM:2.92 TPM:2.86
42 A_TrvaFAMAMG_TR10035c0_g1_i1
311bp
Heterogeneous_nuclear_ribonucleoprotein_A1_[Papilio_xuthus]
FPKM:0.36 TPM:0.35
43 A_TrvaFAMAMG_TR10036c0_g1_i1
568bp
FPKM:1.75 TPM:1.72
44 A_TrvaFAMAMG_TR10037c0_g1_i1
1136bp
PREDICTED:_hydroxyacylglutathione_hydrolase,_mitochondrial_[Amyelois_transitella]
GO:0004416 F hydroxyacylglutathione hydrolase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0016787 F hydrolase activity
GO:0019243 P methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
GO:0046872 F metal ion binding
FPKM:25.31 TPM:24.79
45 A_TrvaFAMAMG_TR10038c0_g1_i1
645bp
PREDICTED:_DNA_polymerase_zeta_catalytic_subunit_isoform_X7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008408 F 3'-5' exonuclease activity
GO:0016035 C zeta DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019985 P translesion synthesis
GO:0042276 P error-prone translesion synthesis
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.93 TPM:0.91
46 A_TrvaFAMAMG_TR10038c0_g2_i1
357bp
PREDICTED:_DNA_polymerase_zeta_catalytic_subunit_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008408 F 3'-5' exonuclease activity
GO:0016035 C zeta DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0019985 P translesion synthesis
GO:0042276 P error-prone translesion synthesis
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.15 TPM:0.15
47 A_TrvaFAMAMG_TR10039c0_g1_i1
490bp
FPKM:0.78 TPM:0.76
48 A_TrvaFAMAMG_TR1003c0_g1_i1
684bp
Mod(mdg4)-heS00531_[Bombyx_mori]
FPKM:0.77 TPM:0.75
49 A_TrvaFAMAMG_TR10040c0_g1_i1
1120bp
fructose-1,6-bisphosphatase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006002 P fructose 6-phosphate metabolic process
GO:0006094 P gluconeogenesis
GO:0006111 P regulation of gluconeogenesis
GO:0008152 P metabolic process
GO:0016208 F AMP binding
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0030308 P negative regulation of cell growth
GO:0035690 P cellular response to xenobiotic stimulus
GO:0042132 F fructose 1,6-bisphosphate 1-phosphatase activity
GO:0042578 F phosphoric ester hydrolase activity
GO:0045820 P negative regulation of glycolytic process
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
GO:0048029 F monosaccharide binding
GO:0051289 P protein homotetramerization
GO:0071286 P cellular response to magnesium ion
FPKM:13.58 TPM:13.30
50 A_TrvaFAMAMG_TR10041c0_g1_i1
353bp
hypothetical_protein_[Clostridium_sp._ASBs410]
FPKM:0.91 TPM:0.89
51 A_TrvaFAMAMG_TR10042c0_g1_i1
342bp
hypothetical_protein_[Actinocatenispora_sera]
FPKM:3.85 TPM:3.77
52 A_TrvaFAMAMG_TR10043c0_g1_i1
233bp
FPKM:0.56 TPM:0.55
53 A_TrvaFAMAMG_TR10044c0_g1_i1
257bp
PREDICTED:_cytochrome_P450_94A1-like_[Phoenix_dactylifera]
FPKM:0.55 TPM:0.53
54 A_TrvaFAMAMG_TR10045c0_g1_i1
351bp
PREDICTED:_protein_charybde-like_[Papilio_xuthus]
FPKM:3.62 TPM:3.54
55 A_TrvaFAMAMG_TR10046c0_g1_i1
390bp
Uncharacterized_protein_OBRU01_12190_[Operophtera_brumata]
FPKM:2.93 TPM:2.87
56 A_TrvaFAMAMG_TR10047c0_g1_i1
238bp
PREDICTED:_uncharacterized_protein_LOC105112614_isoform_X1_[Populus_euphratica]
FPKM:0.93 TPM:0.91
57 A_TrvaFAMAMG_TR10048c0_g1_i1
1476bp
PREDICTED:_serine_protease_snake-like_[Amyelois_transitella]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
FPKM:10.76 TPM:10.55
58 A_TrvaFAMAMG_TR10049c0_g1_i1
785bp
PREDICTED:_Golgi-specific_brefeldin_A-resistance_guanine_nucleotide_exchange_factor_1_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0002263 P cell activation involved in immune response
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005788 C endoplasmic reticulum lumen
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005801 C cis-Golgi network
GO:0005802 C trans-Golgi network
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0006895 P Golgi to endosome transport
GO:0007030 P Golgi organization
GO:0007346 P regulation of mitotic cell cycle
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0030593 P neutrophil chemotaxis
GO:0031252 C cell leading edge
GO:0032012 P regulation of ARF protein signal transduction
GO:0034067 P protein localization to Golgi apparatus
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043547 P positive regulation of GTPase activity
GO:0048205 P COPI coating of Golgi vesicle
GO:0061162 P establishment of monopolar cell polarity
GO:0070973 P protein localization to endoplasmic reticulum exit site
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
GO:0090166 P Golgi disassembly
GO:0097111 P endoplasmic reticulum-Golgi intermediate compartment organization
GO:1903409 P reactive oxygen species biosynthetic process
GO:1903420 P protein localization to endoplasmic reticulum tubular network
GO:2000008 P regulation of protein localization to cell surface
FPKM:11.69 TPM:11.46
59 A_TrvaFAMAMG_TR1004c0_g1_i1
444bp
FPKM:1.02 TPM:0.99
60 A_TrvaFAMAMG_TR10050c0_g1_i1
546bp
FPKM:0.52 TPM:0.51
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