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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

241

A_TrvaFAMAMG_TR10205c0_g1_i1

240bp

FPKM:1.69 TPM:1.65

242

A_TrvaFAMAMG_TR10206c0_g1_i1

424bp

FPKM:0.63 TPM:0.62

243

A_TrvaFAMAMG_TR10207c0_g1_i1

654bp

SSU_ribosomal_protein_S3P_[Enterocytozoon_bieneusi_H348]

GO:0000056	P	ribosomal small subunit export from nucleus
GO:0000737	P	DNA catabolic process, endonucleolytic
GO:0003723	F	RNA binding
GO:0003735	F	structural constituent of ribosome
GO:0003906	F	DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0005829	C	cytosol
GO:0005840	C	ribosome
GO:0006407	P	rRNA export from nucleus
GO:0006412	P	translation
GO:0015935	C	small ribosomal subunit
GO:0022627	C	cytosolic small ribosomal subunit
GO:0030529	C	ribonucleoprotein complex
GO:0030688	C	preribosome, small subunit precursor

FPKM:0.70 TPM:0.69

244

A_TrvaFAMAMG_TR10208c0_g1_i1

440bp

hypothetical_protein_Ccrd_022491_[Cynara_cardunculus_var._scolymus]

FPKM:4.79 TPM:4.69

245

A_TrvaFAMAMG_TR10209c0_g1_i1

757bp

TIGR02680_family_protein_[Thermosinus_carboxydivorans]

FPKM:1.69 TPM:1.66

246

A_TrvaFAMAMG_TR1020c0_g1_i1

377bp

FPKM:6.81 TPM:6.67

247

A_TrvaFAMAMG_TR10210c0_g1_i1

287bp

phage_head-tail_family_protein,_putative_[Tetrahymena_thermophila_SB210]

FPKM:0.93 TPM:0.91

248

A_TrvaFAMAMG_TR10211c0_g1_i1

373bp

FPKM:6.25 TPM:6.13

249

A_TrvaFAMAMG_TR10212c0_g1_i1

285bp

ORF2_[Bombyx_mori]

GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003723	F	RNA binding
GO:0003824	F	catalytic activity
GO:0003887	F	DNA-directed DNA polymerase activity
GO:0003964	F	RNA-directed DNA polymerase activity
GO:0004190	F	aspartic-type endopeptidase activity
GO:0004518	F	nuclease activity
GO:0004519	F	endonuclease activity
GO:0004523	F	RNA-DNA hybrid ribonuclease activity
GO:0004533	F	exoribonuclease H activity
GO:0005198	F	structural molecule activity
GO:0005622	C	intracellular anatomical structure
GO:0006278	P	RNA-dependent DNA biosynthetic process
GO:0006310	P	DNA recombination
GO:0006508	P	proteolysis
GO:0008152	P	metabolic process
GO:0008233	F	peptidase activity
GO:0008270	F	zinc ion binding
GO:0015074	P	DNA integration
GO:0016020	C	membrane
GO:0016032	P	viral process
GO:0016740	F	transferase activity
GO:0016779	F	nucleotidyltransferase activity
GO:0016787	F	hydrolase activity
GO:0019012	C	virion component
GO:0019013	C	viral nucleocapsid
GO:0019028	C	viral capsid
GO:0019076	P	viral release from host cell
GO:0020002	C	host cell plasma membrane
GO:0030430	C	host cell cytoplasm
GO:0033644	C	host cell membrane
GO:0039657	P	suppression by virus of host gene expression
GO:0042025	C	host cell nucleus
GO:0046718	P	viral entry into host cell
GO:0046872	F	metal ion binding
GO:0071897	P	DNA biosynthetic process
GO:0075713	P	establishment of integrated proviral latency
GO:0075732	P	viral penetration into host nucleus
GO:0090305	P	nucleic acid phosphodiester bond hydrolysis
GO:0090502	P	RNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090503	P	RNA phosphodiester bond hydrolysis, exonucleolytic

FPKM:0.34 TPM:0.34

250

A_TrvaFAMAMG_TR10213c0_g1_i1

277bp

PREDICTED:_zinc_finger_protein_62-like_[Trichogramma_pretiosum]

GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0001158	F	cis-regulatory region sequence-specific DNA binding
GO:0003676	F	nucleic acid binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007275	P	multicellular organism development
GO:0008340	P	determination of adult lifespan
GO:0040035	P	hermaphrodite genitalia development
GO:0043053	P	dauer entry
GO:0045684	P	positive regulation of epidermis development
GO:0045944	P	positive regulation of transcription by RNA polymerase II
GO:0046872	F	metal ion binding
GO:1903355	P	negative regulation of distal tip cell migration