SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/144953
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
91 A_BomoN4EE_TR100066_c0_g1_i1
3385bp
 PREDICTED:_uncharacterized_protein_LOC101745010_[Bombyx_mori]
FPKM:0.57 TPM:0.76
92 A_BomoN4EE_TR100067_c0_g1_i1
1295bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:0.89 TPM:1.19
93 A_BomoN4EE_TR100067_c1_g1_i1
391bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:0.73 TPM:0.97
94 A_BomoN4EE_TR100067_c2_g1_i1
232bp
 PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
95 A_BomoN4EE_TR100068_c0_g1_i1
255bp
 PREDICTED:_CAAX_prenyl_protease_2_[Plutella_xylostella]
FPKM:0.41 TPM:0.55
96 A_BomoN4EE_TR100068_c1_g1_i1
287bp
FPKM:0.00 TPM:0.00
97 A_BomoN4EE_TR100069_c0_g1_i1
3198bp
 PREDICTED:_polyphosphoinositide_phosphatase_isoform_X1_[Papilio_xuthus]
GO:0004438 F phosphatidylinositol-3-phosphatase activity
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0007033 P vacuole organization
GO:0007626 P locomotory behavior
GO:0010008 C endosome membrane
GO:0010976 P positive regulation of neuron projection development
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0031642 P negative regulation of myelination
GO:0032288 P myelin assembly
GO:0034593 F phosphatidylinositol bisphosphate phosphatase activity
GO:0042578 F phosphoric ester hydrolase activity
GO:0043473 P pigmentation
GO:0043812 F phosphatidylinositol-4-phosphate phosphatase activity
GO:0046488 P phosphatidylinositol metabolic process
GO:0048666 P neuron development
GO:0055037 C recycling endosome
FPKM:11.57 TPM:15.42
98 A_BomoN4EE_TR100069_c0_g2_i1
3194bp
 PREDICTED:_polyphosphoinositide_phosphatase_isoform_X1_[Papilio_xuthus]
GO:0004438 F phosphatidylinositol-3-phosphatase activity
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0007033 P vacuole organization
GO:0007626 P locomotory behavior
GO:0010008 C endosome membrane
GO:0010976 P positive regulation of neuron projection development
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0031642 P negative regulation of myelination
GO:0032288 P myelin assembly
GO:0034593 F phosphatidylinositol bisphosphate phosphatase activity
GO:0042578 F phosphoric ester hydrolase activity
GO:0043473 P pigmentation
GO:0043812 F phosphatidylinositol-4-phosphate phosphatase activity
GO:0046488 P phosphatidylinositol metabolic process
GO:0048666 P neuron development
GO:0055037 C recycling endosome
FPKM:1.18 TPM:1.58
99 A_BomoN4EE_TR10006_c0_g1_i1
778bp
FPKM:0.74 TPM:0.99
100 A_BomoN4EE_TR100070_c0_g1_i1
1808bp
 PREDICTED:_homeobox_protein_Nkx-6.2_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0031016 P pancreas development
GO:0043565 F sequence-specific DNA binding
GO:0044342 P type B pancreatic cell proliferation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0051594 P detection of glucose
GO:0072560 P type B pancreatic cell maturation
GO:2000078 P positive regulation of type B pancreatic cell development
FPKM:3.17 TPM:4.22
101 A_BomoN4EE_TR100070_c0_g1_i2
1823bp
 PREDICTED:_homeobox_protein_Nkx-6.2_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0031016 P pancreas development
GO:0043565 F sequence-specific DNA binding
GO:0044342 P type B pancreatic cell proliferation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0051594 P detection of glucose
GO:0072560 P type B pancreatic cell maturation
GO:2000078 P positive regulation of type B pancreatic cell development
FPKM:0.65 TPM:0.86
102 A_BomoN4EE_TR100070_c0_g2_i1
936bp
 Benomyl/methotrexate_resistance_protein_[Operophtera_brumata]
FPKM:0.55 TPM:0.74
103 A_BomoN4EE_TR100071_c0_g1_i1
1258bp
 THAP_domain-containing_protein_[Operophtera_brumata]
FPKM:6.39 TPM:8.51
104 A_BomoN4EE_TR100071_c0_g1_i2
1125bp
 THAP_domain-containing_protein_[Operophtera_brumata]
FPKM:3.97 TPM:5.29
105 A_BomoN4EE_TR100071_c0_g1_i3
1451bp
 PREDICTED:_THAP_domain-containing_protein_1-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005730 C nucleolus
GO:0046872 F metal ion binding
FPKM:12.69 TPM:16.91
106 A_BomoN4EE_TR100071_c0_g1_i4
1318bp
 PREDICTED:_THAP_domain-containing_protein_1-like_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005730 C nucleolus
GO:0008150 P biological_process
GO:0046872 F metal ion binding
FPKM:33.40 TPM:44.49
107 A_BomoN4EE_TR100072_c0_g1_i1
1305bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:2.87 TPM:3.82
108 A_BomoN4EE_TR100073_c0_g1_i1
513bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.18 TPM:1.57
109 A_BomoN4EE_TR100074_c0_g1_i1
946bp
 PREDICTED:_oxygen_resistance_gene_1_isoform_X2_[Bombyx_mori]
FPKM:0.77 TPM:1.03
110 A_BomoN4EE_TR100074_c0_g2_i1
457bp
 PTS_ascorbate_transporter_subunit_IIB,_partial_[Enterococcus_mundtii]
FPKM:0.33 TPM:0.44
111 A_BomoN4EE_TR100074_c1_g1_i1
4999bp
 PREDICTED:_oxygen_resistance_gene_1_isoform_X11_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030374 F nuclear receptor coactivator activity
GO:0035257 F nuclear receptor binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
FPKM:15.57 TPM:20.74
112 A_BomoN4EE_TR100074_c2_g1_i1
449bp
FPKM:0.34 TPM:0.45
113 A_BomoN4EE_TR100075_c0_g1_i1
2135bp
 PREDICTED:_adrenodoxin-like_protein,_mitochondrial_[Amyelois_transitella]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0009055 F electron transfer activity
GO:0035073 P pupariation
GO:0045998 P positive regulation of ecdysteroid biosynthetic process
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:9.97 TPM:13.28
114 A_BomoN4EE_TR100075_c0_g2_i1
2136bp
 PREDICTED:_adrenodoxin-like_protein,_mitochondrial_[Amyelois_transitella]
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0009055 F electron transfer activity
GO:0035073 P pupariation
GO:0045998 P positive regulation of ecdysteroid biosynthetic process
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.88 TPM:1.17
115 A_BomoN4EE_TR100076_c0_g1_i1
319bp
 chorion_class_A_[Bombyx_mori]
FPKM:0.90 TPM:1.20
116 A_BomoN4EE_TR100076_c0_g2_i1
310bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
117 A_BomoN4EE_TR100076_c1_g1_i1
1451bp
 PREDICTED:_dual_serine/threonine_and_tyrosine_protein_kinase-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
FPKM:4.08 TPM:5.43
118 A_BomoN4EE_TR100077_c0_g1_i1
723bp
FPKM:0.33 TPM:0.44
119 A_BomoN4EE_TR100077_c0_g2_i1
322bp
FPKM:0.00 TPM:0.00
120 A_BomoN4EE_TR100077_c1_g1_i1
740bp
FPKM:0.16 TPM:0.21
previous next from show/144953

- SilkBase 1999-2023 -