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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

421

A_BomoN4EE_TR100229_c0_g1_i1

730bp

Bomo_Chr21

NADH_dehydrogenase_(ubiquinone)_1_alpha_subcomplex,_13_[Bombyx_mori]

FPKM:0.65 TPM:0.86

422

A_BomoN4EE_TR10022_c0_g1_i1

366bp

Bomo_Chr20

FPKM:0.50 TPM:0.67

423

A_BomoN4EE_TR100230_c0_g1_i1

1765bp

Bomo_Chr18

hypothetical_protein_KGM_20403_[Danaus_plexippus]

GO:0005764	C	lysosome
GO:0005765	C	lysosomal membrane
GO:0005768	C	endosome
GO:0006810	P	transport
GO:0010008	C	endosome membrane
GO:0015232	F	heme transmembrane transporter activity
GO:0015886	P	heme transport
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0048821	P	erythrocyte development

FPKM:20.47 TPM:27.27

424

A_BomoN4EE_TR100231_c0_g1_i1

315bp

Bomo_Chr11

FPKM:0.93 TPM:1.24

425

A_BomoN4EE_TR100232_c0_g1_i1

599bp

Bomo_Chr25

FPKM:0.50 TPM:0.67

426

A_BomoN4EE_TR100233_c0_g1_i1

315bp

Bomo_Chr9

FPKM:1.39 TPM:1.86

427

A_BomoN4EE_TR100234_c0_g1_i1

1163bp

Bomo_Chr11

FPKM:2.00 TPM:2.67

428

A_BomoN4EE_TR100235_c0_g1_i1

1273bp

Bomo_Chr5

PREDICTED:_atlastin-like_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0003924	F	GTPase activity
GO:0005525	F	GTP binding
GO:0005783	C	endoplasmic reticulum
GO:0005789	C	endoplasmic reticulum membrane
GO:0007029	P	endoplasmic reticulum organization
GO:0007030	P	Golgi organization
GO:0008152	P	metabolic process
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016787	F	hydrolase activity
GO:0042802	F	identical protein binding
GO:0051260	P	protein homooligomerization

FPKM:0.48 TPM:0.64

429

A_BomoN4EE_TR100236_c0_g1_i1

456bp

Bomo_Chr19

FPKM:0.33 TPM:0.44

430

A_BomoN4EE_TR100237_c0_g1_i1

886bp

Bomo_Chr14

PREDICTED:_uncharacterized_protein_LOC105842564_[Bombyx_mori]

FPKM:0.67 TPM:0.89

431

A_BomoN4EE_TR100238_c0_g1_i1

816bp

Bomo_Chr24

RNA_polymerase_subunit_sigma-24_[[Clostridium]_clariflavum]

FPKM:11.54 TPM:15.37

432

A_BomoN4EE_TR100239_c0_g1_i1

676bp

Bomo_Chr18

FPKM:0.72 TPM:0.96

433

A_BomoN4EE_TR10023_c0_g1_i1

359bp

Bomo_Chr20

FPKM:0.17 TPM:0.23

434

A_BomoN4EE_TR100240_c0_g1_i1

496bp

Bomo_Chr19

PREDICTED:_alpha-amylase_2-like_[Bombyx_mori]

GO:0003824	F	catalytic activity
GO:0004556	F	alpha-amylase activity
GO:0005576	C	extracellular region
GO:0005975	P	carbohydrate metabolic process
GO:0008152	P	metabolic process
GO:0016787	F	hydrolase activity
GO:0016798	F	hydrolase activity, acting on glycosyl bonds
GO:0043169	F	cation binding
GO:0046872	F	metal ion binding

FPKM:0.29 TPM:0.38

435

A_BomoN4EE_TR100241_c0_g1_i1

280bp

Bomo_Chr23

FPKM:0.63 TPM:0.84

436

A_BomoN4EE_TR100242_c0_g1_i1

232bp

Bomo_Chr18

cobalt_chelatase_(CbiK)_[Faecalibacterium_cf._prausnitzii_KLE1255]

FPKM:0.00 TPM:0.00

437

A_BomoN4EE_TR100243_c0_g1_i1

2364bp

Bomo_Chr6

vacuolar_protein_sorting_4_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005768	C	endosome
GO:0005769	C	early endosome
GO:0006810	P	transport
GO:0007033	P	vacuole organization
GO:0007049	P	cell cycle
GO:0008152	P	metabolic process
GO:0008568	F	microtubule-severing ATPase activity
GO:0009838	P	abscission
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0016197	P	endosomal transport
GO:0016787	F	hydrolase activity
GO:0016887	F	ATP hydrolysis activity
GO:0017048	F	small GTPase binding
GO:0030496	C	midbody
GO:0031122	P	cytoplasmic microtubule organization
GO:0031902	C	late endosome membrane
GO:0032466	P	negative regulation of cytokinesis
GO:0051301	P	cell division
GO:1903774	P	positive regulation of viral budding via host ESCRT complex

FPKM:61.44 TPM:81.84

438

A_BomoN4EE_TR100244_c0_g1_i1

1945bp

Bomo_Chr22

vacuolar_ATP_synthase_21_kDa_proteolipid_subunit_[Bombyx_mori]

GO:0000220	C	vacuolar proton-transporting V-type ATPase, V0 domain
GO:0005768	C	endosome
GO:0005773	C	vacuole
GO:0005774	C	vacuolar membrane
GO:0006810	P	transport
GO:0006811	P	ion transport
GO:0007035	P	vacuolar acidification
GO:0015078	F	proton transmembrane transporter activity
GO:0015991	P	proton transmembrane transport
GO:0015992	P	proton transmembrane transport
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0033177	C	proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179	C	proton-transporting V-type ATPase, V0 domain
GO:0046961	F	proton-transporting ATPase activity, rotational mechanism

FPKM:65.77 TPM:87.61

439

A_BomoN4EE_TR100245_c0_g1_i1

567bp

Bomo_Chr22

indolepyruvate_ferredoxin_oxidoreductase_[Porphyromonas_gulae]

FPKM:0.23 TPM:0.31

440

A_BomoN4EE_TR100246_c0_g1_i1

224bp

Bomo_Chr22

gliding_motility-associated_ABC_transporter_substrate-binding_protein_GldG_[Croceibacter_atlanticus]

FPKM:1.28 TPM:1.70

441

A_BomoN4EE_TR100247_c0_g1_i1

282bp

Bomo_Chr10

FPKM:0.92 TPM:1.23

442

A_BomoN4EE_TR100248_c0_g1_i1

1724bp

Bomo_Chr1

PREDICTED:_peptidoglycan_recognition_protein-like_isoform_X2_[Bombyx_mori]

GO:0002376	P	immune system process
GO:0005576	C	extracellular region
GO:0008270	F	zinc ion binding
GO:0008745	F	N-acetylmuramoyl-L-alanine amidase activity
GO:0009253	P	peptidoglycan catabolic process
GO:0016787	F	hydrolase activity
GO:0045087	P	innate immune response
GO:0046872	F	metal ion binding

FPKM:0.64 TPM:0.86

443

A_BomoN4EE_TR100249_c0_g1_i1

242bp

Bomo_Chr16

hypothetical_protein_Z043_109538_[Scleropages_formosus]

FPKM:0.00 TPM:0.00

444

A_BomoN4EE_TR10024_c0_g1_i1

265bp

Bomo_Chr5

FPKM:1.10 TPM:1.47

445

A_BomoN4EE_TR100250_c0_g1_i1

562bp

Bomo_Chr5

RNA_binding_motif_protein_17_[Bombyx_mori]

FPKM:4.16 TPM:5.54

446

A_BomoN4EE_TR100251_c0_g1_i1

517bp

Bomo_Chr18

ankyrin_repeat-containing_protein,_putative_[Talaromyces_marneffei_ATCC_18224]

FPKM:0.45 TPM:0.60

447

A_BomoN4EE_TR100252_c0_g1_i1

256bp

Bomo_Chr19

FPKM:0.00 TPM:0.00

448

A_BomoN4EE_TR100253_c0_g1_i1

1511bp

Bomo_Chr20

ovary_C/EBPg_transcription_factor_[Bombyx_mori]

GO:0000978	F	RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077	F	DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001889	P	liver development
GO:0003677	F	DNA binding
GO:0003690	F	double-stranded DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0006337	P	nucleosome disassembly
GO:0006338	P	chromatin remodeling
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006357	P	regulation of transcription by RNA polymerase II
GO:0006366	P	transcription by RNA polymerase II
GO:0006955	P	immune response
GO:0008134	F	transcription factor binding
GO:0016071	P	mRNA metabolic process
GO:0030183	P	B cell differentiation
GO:0042267	P	natural killer cell mediated cytotoxicity
GO:0042803	F	protein homodimerization activity
GO:0043353	P	enucleate erythrocyte differentiation
GO:0043433	P	negative regulation of DNA-binding transcription factor activity
GO:0043565	F	sequence-specific DNA binding
GO:0044377	F	RNA polymerase II cis-regulatory region sequence-specific DNA binding, bending
GO:0045078	P	positive regulation of interferon-gamma production
GO:0045739	P	positive regulation of DNA repair
GO:0045944	P	positive regulation of transcription by RNA polymerase II
GO:0046982	F	protein heterodimerization activity