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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2251 A_BomoN4EE_TR10140_c0_g1_i1
245bp
FPKM:0.47 TPM:0.62
2252 A_BomoN4EE_TR101410_c0_g1_i1
316bp
FPKM:0.23 TPM:0.31
2253 A_BomoN4EE_TR101411_c0_g1_i1
304bp
FPKM:0.51 TPM:0.67
2254 A_BomoN4EE_TR101412_c0_g1_i1
269bp
FPKM:0.00 TPM:0.00
2255 A_BomoN4EE_TR101413_c0_g1_i1
296bp
FPKM:0.27 TPM:0.36
2256 A_BomoN4EE_TR101414_c0_g1_i1
359bp
FPKM:1.04 TPM:1.38
2257 A_BomoN4EE_TR101415_c0_g1_i1
371bp
 PREDICTED:_translocation_protein_SEC63_homolog_[Amyelois_transitella]
FPKM:1.62 TPM:2.16
2258 A_BomoN4EE_TR101416_c0_g1_i1
278bp
 hypothetical_protein_[Pleomorphomonas_oryzae]
FPKM:0.96 TPM:1.28
2259 A_BomoN4EE_TR101417_c0_g1_i1
312bp
 AGAP010838-PA_[Anopheles_gambiae_str._PEST]
FPKM:0.95 TPM:1.27
2260 A_BomoN4EE_TR101418_c0_g1_i1
547bp
 hypothetical_protein_[Marinobacterium_sp._AK27]
FPKM:0.08 TPM:0.11
2261 A_BomoN4EE_TR101419_c0_g1_i1
303bp
FPKM:0.13 TPM:0.17
2262 A_BomoN4EE_TR101419_c0_g2_i1
303bp
 tRNA(Ile)-lysidine_synthase_[Marinobacterium_jannaschii]
FPKM:0.13 TPM:0.17
2263 A_BomoN4EE_TR10141_c0_g1_i1
331bp
 TonB-dependent_receptor,_partial_[Xanthomonas_campestris_pv._musacearum_NCPPB_4392]
FPKM:1.45 TPM:1.93
2264 A_BomoN4EE_TR101420_c0_g1_i1
546bp
FPKM:0.41 TPM:0.55
2265 A_BomoN4EE_TR101421_c0_g1_i1
336bp
FPKM:0.40 TPM:0.53
2266 A_BomoN4EE_TR101422_c0_g1_i1
328bp
 transposase_[Antheraea_pernyi]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:0.21 TPM:0.28
2267 A_BomoN4EE_TR101423_c0_g1_i1
662bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:0.25 TPM:0.33
2268 A_BomoN4EE_TR101424_c0_g1_i1
421bp
FPKM:0.25 TPM:0.34
2269 A_BomoN4EE_TR101425_c0_g1_i1
720bp
FPKM:0.88 TPM:1.17
2270 A_BomoN4EE_TR101426_c0_g1_i1
637bp
FPKM:0.59 TPM:0.78
2271 A_BomoN4EE_TR101427_c0_g1_i1
539bp
 Long-chain-alcohol_oxidase_FAO4A_[Arabidopsis_thaliana]
FPKM:0.33 TPM:0.45
2272 A_BomoN4EE_TR101428_c0_g1_i1
479bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_8-like_[Bombyx_mori]
FPKM:0.10 TPM:0.13
2273 A_BomoN4EE_TR101429_c0_g1_i1
899bp
 PREDICTED:_putative_adenosylhomocysteinase_3_isoform_X2_[Bombyx_mori]
GO:0004013 F adenosylhomocysteinase activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006730 P one-carbon metabolic process
GO:0016787 F hydrolase activity
GO:0043231 C intracellular membrane-bounded organelle
FPKM:0.57 TPM:0.77
2274 A_BomoN4EE_TR10142_c0_g1_i1
367bp
 hypothetical_protein_A1O7_00774_[Cladophialophora_yegresii_CBS_114405]
FPKM:0.83 TPM:1.10
2275 A_BomoN4EE_TR101430_c0_g1_i1
302bp
FPKM:1.03 TPM:1.37
2276 A_BomoN4EE_TR101431_c0_g1_i1
264bp
 PREDICTED:_thyroid_receptor-interacting_protein_11-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2277 A_BomoN4EE_TR101432_c0_g1_i1
237bp
FPKM:1.05 TPM:1.39
2278 A_BomoN4EE_TR101433_c0_g1_i1
429bp
 PREDICTED:_5'-3'_exoribonuclease_2_homolog_[Papilio_xuthus]
FPKM:0.61 TPM:0.82
2279 A_BomoN4EE_TR101434_c0_g1_i1
378bp
FPKM:0.16 TPM:0.21
2280 A_BomoN4EE_TR101435_c0_g1_i1
480bp
FPKM:0.40 TPM:0.54
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