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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1831 A_BomoN4EE_TR101198_c0_g1_i3
4034bp
 truncated_xanthine_dehydrogenase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004854 F xanthine dehydrogenase activity
GO:0004855 F xanthine oxidase activity
GO:0005506 F iron ion binding
GO:0005777 C peroxisome
GO:0009055 F electron transfer activity
GO:0009115 P xanthine catabolic process
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0043546 F molybdopterin cofactor binding
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:0.67 TPM:0.89
1832 A_BomoN4EE_TR101198_c0_g1_i4
4177bp
 xanthine_dehydrogenase_1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004854 F xanthine dehydrogenase activity
GO:0004855 F xanthine oxidase activity
GO:0005506 F iron ion binding
GO:0005777 C peroxisome
GO:0009055 F electron transfer activity
GO:0009115 P xanthine catabolic process
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0043546 F molybdopterin cofactor binding
GO:0046872 F metal ion binding
GO:0050660 F flavin adenine dinucleotide binding
GO:0051536 F iron-sulfur cluster binding
GO:0051537 F 2 iron, 2 sulfur cluster binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:6.59 TPM:8.78
1833 A_BomoN4EE_TR101198_c1_g1_i1
1294bp
FPKM:2.24 TPM:2.98
1834 A_BomoN4EE_TR101199_c0_g1_i1
1827bp
 PREDICTED:_histone_acetyltransferase_Tip60_isoform_X4_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043486 P histone exchange
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043967 P histone H4 acetylation
GO:0048167 P regulation of synaptic plasticity
GO:2000331 P regulation of terminal button organization
FPKM:20.21 TPM:26.92
1835 A_BomoN4EE_TR101199_c0_g1_i2
4239bp
 PREDICTED:_histone_acetyltransferase_Tip60_isoform_X4_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043486 P histone exchange
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043967 P histone H4 acetylation
GO:0048167 P regulation of synaptic plasticity
GO:2000331 P regulation of terminal button organization
FPKM:1.06 TPM:1.41
1836 A_BomoN4EE_TR101199_c0_g1_i3
4227bp
 PREDICTED:_histone_acetyltransferase_Tip60_isoform_X4_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043486 P histone exchange
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043967 P histone H4 acetylation
GO:0048167 P regulation of synaptic plasticity
GO:2000331 P regulation of terminal button organization
FPKM:3.95 TPM:5.26
1837 A_BomoN4EE_TR101199_c0_g1_i4
1839bp
 PREDICTED:_histone_acetyltransferase_Tip60_isoform_X4_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043486 P histone exchange
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043967 P histone H4 acetylation
GO:0048167 P regulation of synaptic plasticity
GO:2000331 P regulation of terminal button organization
FPKM:6.58 TPM:8.76
1838 A_BomoN4EE_TR101199_c0_g2_i1
577bp
 PREDICTED:_histone_acetyltransferase_Tip60_isoform_X4_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005705 C polytene chromosome interband
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0043486 P histone exchange
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043967 P histone H4 acetylation
GO:0048167 P regulation of synaptic plasticity
GO:2000331 P regulation of terminal button organization
FPKM:0.16 TPM:0.21
1839 A_BomoN4EE_TR10119_c0_g1_i1
265bp
FPKM:0.00 TPM:0.00
1840 A_BomoN4EE_TR1011_c0_g1_i1
416bp
 PREDICTED:_WEB_family_protein_At4g27595,_chloroplastic-like_isoform_X2_[Bombyx_mori]
FPKM:1.69 TPM:2.25
1841 A_BomoN4EE_TR101200_c0_g1_i1
1424bp
 PREDICTED:_beta-secretase_1-like_[Bombyx_mori]
GO:0001540 F amyloid-beta binding
GO:0004175 F endopeptidase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005771 C multivesicular body
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0008233 F peptidase activity
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019899 F enzyme binding
GO:0030163 P protein catabolic process
GO:0030424 C axon
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0050435 P amyloid-beta metabolic process
FPKM:0.15 TPM:0.20
1842 A_BomoN4EE_TR101200_c0_g1_i2
1861bp
 PREDICTED:_beta-secretase_1-like_[Bombyx_mori]
GO:0001540 F amyloid-beta binding
GO:0004175 F endopeptidase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005771 C multivesicular body
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0008233 F peptidase activity
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019899 F enzyme binding
GO:0030163 P protein catabolic process
GO:0030424 C axon
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0050435 P amyloid-beta metabolic process
FPKM:0.44 TPM:0.58
1843 A_BomoN4EE_TR101200_c0_g1_i3
1937bp
 PREDICTED:_beta-secretase_1-like_[Bombyx_mori]
GO:0001540 F amyloid-beta binding
GO:0004175 F endopeptidase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005771 C multivesicular body
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0008233 F peptidase activity
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019899 F enzyme binding
GO:0030163 P protein catabolic process
GO:0030424 C axon
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0050435 P amyloid-beta metabolic process
FPKM:3.83 TPM:5.10
1844 A_BomoN4EE_TR101200_c0_g1_i4
1189bp
 PREDICTED:_beta-secretase_1-like_[Bombyx_mori]
GO:0001540 F amyloid-beta binding
GO:0004175 F endopeptidase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005771 C multivesicular body
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0008233 F peptidase activity
GO:0008798 F beta-aspartyl-peptidase activity
GO:0009986 C cell surface
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019899 F enzyme binding
GO:0030163 P protein catabolic process
GO:0030424 C axon
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0044267 P cellular protein metabolic process
GO:0050435 P amyloid-beta metabolic process
GO:0070931 C Golgi-associated vesicle lumen
FPKM:0.00 TPM:0.00
1845 A_BomoN4EE_TR101200_c1_g1_i1
229bp
FPKM:0.59 TPM:0.79
1846 A_BomoN4EE_TR101201_c0_g1_i1
1826bp
 PREDICTED:_protein_disulfide-isomerase_TMX3_[Amyelois_transitella]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016853 F isomerase activity
GO:0045454 P cell redox homeostasis
FPKM:17.80 TPM:23.71
1847 A_BomoN4EE_TR101201_c0_g2_i1
1960bp
 PREDICTED:_uncharacterized_protein_LOC105842887,_partial_[Bombyx_mori]
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005884 C actin filament
GO:0006457 P protein folding
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0010923 P negative regulation of phosphatase activity
GO:0016020 C membrane
GO:0030424 C axon
GO:0030426 C growth cone
GO:0042995 C cell projection
FPKM:4.40 TPM:5.86
1848 A_BomoN4EE_TR101201_c0_g2_i2
2297bp
 PREDICTED:_uncharacterized_protein_LOC105842887,_partial_[Bombyx_mori]
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0003779 F actin binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005884 C actin filament
GO:0006457 P protein folding
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0010923 P negative regulation of phosphatase activity
GO:0016020 C membrane
GO:0030424 C axon
GO:0030426 C growth cone
GO:0042995 C cell projection
FPKM:5.29 TPM:7.04
1849 A_BomoN4EE_TR101201_c0_g3_i1
1546bp
 PREDICTED:_protein_disulfide-isomerase_TMX3_[Amyelois_transitella]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016853 F isomerase activity
GO:0045454 P cell redox homeostasis
FPKM:2.02 TPM:2.70
1850 A_BomoN4EE_TR101202_c0_g1_i1
4327bp
FPKM:10.15 TPM:13.52
1851 A_BomoN4EE_TR101203_c0_g1_i1
243bp
 PREDICTED:_peripheral-type_benzodiazepine_receptor-associated_protein_1_isoform_X5_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1852 A_BomoN4EE_TR101203_c0_g2_i1
569bp
 PREDICTED:_peripheral-type_benzodiazepine_receptor-associated_protein_1_isoform_X4_[Bombyx_mori]
FPKM:0.21 TPM:0.28
1853 A_BomoN4EE_TR101203_c0_g3_i1
568bp
 PREDICTED:_RIMS-binding_protein_2_isoform_X1_[Bombyx_mori]
FPKM:1.49 TPM:1.98
1854 A_BomoN4EE_TR101203_c1_g1_i1
301bp
 conserved_hypothetical_protein_[Leishmania_braziliensis_MHOM/BR/75/M2904]
FPKM:1.04 TPM:1.38
1855 A_BomoN4EE_TR101204_c0_g1_i1
272bp
 PREDICTED:_stromelysin-3_[Latimeria_chalumnae]
FPKM:5.79 TPM:7.71
1856 A_BomoN4EE_TR101204_c0_g2_i1
282bp
 mannoprotein_[Cryptococcus_neoformans]
FPKM:27.72 TPM:36.92
1857 A_BomoN4EE_TR101205_c0_g1_i1
613bp
 PREDICTED:_synaptosomal-associated_protein_25_isoform_X1_[Papilio_polytes]
FPKM:1.93 TPM:2.57
1858 A_BomoN4EE_TR101205_c1_g1_i1
1374bp
 hypothetical_protein_RR48_07290_[Papilio_machaon]
FPKM:1.27 TPM:1.69
1859 A_BomoN4EE_TR101205_c1_g2_i1
1937bp
 hypothetical_protein_RR48_07290_[Papilio_machaon]
FPKM:4.39 TPM:5.85
1860 A_BomoN4EE_TR101206_c0_g1_i1
922bp
 PREDICTED:_3-ketoacyl-CoA_thiolase,_mitochondrial-like_isoform_X1_[Amyelois_transitella]
GO:0003824 F catalytic activity
GO:0003988 F acetyl-CoA C-acyltransferase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
GO:0071456 P cellular response to hypoxia
GO:1901029 P negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway
GO:1902109 P negative regulation of mitochondrial membrane permeability involved in apoptotic process
FPKM:0.21 TPM:0.27
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