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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1561 A_BomoN4EE_TR10099_c0_g1_i1
502bp
FPKM:1.03 TPM:1.37
1562 A_BomoN4EE_TR1009_c0_g1_i1
224bp
FPKM:0.64 TPM:0.85
1563 A_BomoN4EE_TR100_c0_g1_i1
274bp
 PREDICTED:_zinc_finger_protein_676_[Papio_anubis]
FPKM:0.33 TPM:0.44
1564 A_BomoN4EE_TR101000_c0_g1_i1
244bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.47 TPM:0.63
1565 A_BomoN4EE_TR101001_c0_g1_i1
400bp
 Rh-like_protein_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1566 A_BomoN4EE_TR101001_c0_g2_i1
427bp
 Rh-like_protein_[Bombyx_mori]
FPKM:0.00 TPM:0.00
1567 A_BomoN4EE_TR101002_c1_g1_i1
401bp
 hypothetical_protein_[Flavobacterium_johnsoniae]
FPKM:0.28 TPM:0.37
1568 A_BomoN4EE_TR101003_c0_g1_i1
271bp
 PREDICTED:_uncharacterized_protein_LOC101739136_[Bombyx_mori]
FPKM:0.34 TPM:0.46
1569 A_BomoN4EE_TR101004_c0_g1_i1
1130bp
 cell_division_protein_[Bombyx_mori]
GO:0001510 P RNA methylation
GO:0002128 P tRNA nucleoside ribose methylation
GO:0002181 P cytoplasmic translation
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0008175 F tRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
FPKM:47.30 TPM:63.01
1570 A_BomoN4EE_TR101005_c0_g1_i1
266bp
 PREDICTED:_TMV_resistance_protein_N-like_[Eucalyptus_grandis]
FPKM:0.73 TPM:0.97
1571 A_BomoN4EE_TR101006_c0_g1_i1
244bp
 putative_protein_[Bombyx_mori]
FPKM:2.37 TPM:3.16
1572 A_BomoN4EE_TR101007_c0_g1_i1
981bp
 Nep1_protein_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0009267 P cellular response to starvation
GO:0016740 F transferase activity
GO:0019843 F rRNA binding
GO:0022008 P neurogenesis
GO:0031167 P rRNA methylation
GO:0032040 C small-subunit processome
GO:0032259 P methylation
GO:0040018 P positive regulation of multicellular organism growth
GO:0042254 P ribosome biogenesis
GO:0042742 P defense response to bacterium
GO:0070037 F rRNA (pseudouridine) methyltransferase activity
GO:0070475 P rRNA base methylation
FPKM:38.22 TPM:50.91
1573 A_BomoN4EE_TR101008_c0_g1_i1
309bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:16.79 TPM:22.36
1574 A_BomoN4EE_TR101009_c0_g1_i1
880bp
FPKM:1.35 TPM:1.80
1575 A_BomoN4EE_TR10100_c0_g1_i1
228bp
 hypothetical_protein_AX768_07050_[Burkholderia_sp._PAMC_28687]
FPKM:0.60 TPM:0.80
1576 A_BomoN4EE_TR101010_c0_g1_i1
269bp
FPKM:0.35 TPM:0.47
1577 A_BomoN4EE_TR101010_c0_g2_i1
736bp
 hypothetical_protein_KGM_15220_[Danaus_plexippus]
FPKM:1.17 TPM:1.56
1578 A_BomoN4EE_TR101011_c0_g1_i1
454bp
FPKM:0.44 TPM:0.59
1579 A_BomoN4EE_TR101012_c0_g1_i1
277bp
 histidinol_dehydrogenase_[Ruminococcus_flavefaciens]
FPKM:0.97 TPM:1.29
1580 A_BomoN4EE_TR101013_c0_g1_i1
348bp
 PREDICTED:_transposable_element_Tcb1_transposase_[Amyelois_transitella]
FPKM:0.93 TPM:1.23
1581 A_BomoN4EE_TR101014_c0_g1_i1
236bp
FPKM:0.53 TPM:0.71
1582 A_BomoN4EE_TR101015_c0_g1_i1
875bp
FPKM:0.64 TPM:0.85
1583 A_BomoN4EE_TR101016_c0_g1_i1
379bp
FPKM:0.62 TPM:0.83
1584 A_BomoN4EE_TR101017_c0_g1_i1
583bp
 biosynthetic_aromatic_amino_acid_aminotransferase_alpha_[Microcystis_aeruginosa_NIES-44]
FPKM:0.59 TPM:0.79
1585 A_BomoN4EE_TR101018_c0_g1_i1
242bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.97 TPM:1.30
1586 A_BomoN4EE_TR101019_c0_g1_i1
252bp
FPKM:0.43 TPM:0.57
1587 A_BomoN4EE_TR10101_c0_g1_i1
402bp
FPKM:0.28 TPM:0.37
1588 A_BomoN4EE_TR101020_c0_g1_i1
254bp
FPKM:0.42 TPM:0.56
1589 A_BomoN4EE_TR101021_c0_g1_i1
300bp
FPKM:0.52 TPM:0.70
1590 A_BomoN4EE_TR101022_c0_g1_i1
451bp
FPKM:0.79 TPM:1.05
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