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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
481 A_TrvaMG_comp11272_c0_seq1
571bp
hemolymph_protein_14_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0005903 C brush border
GO:0005905 C clathrin-coated pit
GO:0006766 P vitamin metabolic process
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0007568 P aging
GO:0010165 P response to X-ray
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016197 P endosomal transport
GO:0016324 C apical plasma membrane
GO:0017124 F SH3 domain binding
GO:0020028 P endocytic hemoglobin import into cell
GO:0030165 F PDZ domain binding
GO:0030492 F hemoglobin binding
GO:0031100 P animal organ regeneration
GO:0031526 C brush border membrane
GO:0032403 F protein-containing complex binding
GO:0032526 P response to retinoic acid
GO:0033280 P response to vitamin D
GO:0042493 P response to xenobiotic stimulus
GO:0042562 F hormone binding
GO:0042953 P lipoprotein transport
GO:0042954 F obsolete lipoprotein transporter activity
GO:0043234 C protein-containing complex
GO:0045056 P transcytosis
GO:0045121 C membrane raft
GO:0046872 F metal ion binding
GO:0046879 P hormone secretion
GO:0050750 F low-density lipoprotein particle receptor binding
FPKM:2.05 TPM:1.73
482 A_TrvaMG_comp11273_c0_seq1
326bp
hypothetical_protein_[Pseudorhodobacter_aquimaris]
FPKM:3.38 TPM:2.85
483 A_TrvaMG_comp11275_c0_seq1
463bp
FPKM:2.67 TPM:2.25
484 A_TrvaMG_comp11276_c0_seq1
1648bp
cytochrome_P450_4G4_[Manduca_sexta]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006694 P steroid biosynthetic process
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0019233 P sensory perception of pain
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.82 TPM:1.53
485 A_TrvaMG_comp11276_c1_seq1
323bp
FPKM:0.91 TPM:0.76
486 A_TrvaMG_comp11277_c0_seq1
1705bp
PREDICTED:_uncharacterized_protein_LOC101742944_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0008083 F growth factor activity
GO:0016020 C membrane
GO:0051781 P positive regulation of cell division
FPKM:1.14 TPM:0.96
487 A_TrvaMG_comp11277_c0_seq2
1672bp
PREDICTED:_uncharacterized_protein_LOC101742944_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0008083 F growth factor activity
GO:0016020 C membrane
GO:0051781 P positive regulation of cell division
FPKM:0.93 TPM:0.78
488 A_TrvaMG_comp11278_c0_seq1
849bp
PREDICTED:_uncharacterized_protein_LOC106134324_[Amyelois_transitella]
FPKM:2.50 TPM:2.11
489 A_TrvaMG_comp11279_c0_seq1
1184bp
PREDICTED:_putative_glycerol_kinase_5_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
FPKM:2.04 TPM:1.72
490 A_TrvaMG_comp11280_c0_seq1
268bp
PREDICTED:_sodium-coupled_monocarboxylate_transporter_2-like_[Papilio_polytes]
GO:0005215 F transporter activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0015293 F symporter activity
GO:0015355 F secondary active monocarboxylate transmembrane transporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:3.22 TPM:2.71
491 A_TrvaMG_comp11281_c0_seq1
846bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_nonstop_[Papilio_machaon]
GO:0000124 C SAGA complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007411 P axon guidance
GO:0007412 P axon target recognition
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0008347 P glial cell migration
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021782 P glial cell development
GO:0036459 F thiol-dependent deubiquitinase
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071819 C DUBm complex
FPKM:1.94 TPM:1.63
492 A_TrvaMG_comp11282_c0_seq1
205bp
FPKM:1.15 TPM:0.97
493 A_TrvaMG_comp11282_c0_seq2
289bp
succinate_dehydrogenase_[Staphylococcus_saprophyticus]
FPKM:2.95 TPM:2.48
494 A_TrvaMG_comp11283_c0_seq1
1014bp
PREDICTED:_peptidyl-prolyl_cis-trans_isomerase-like_4_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0016853 F isomerase activity
GO:0044822 F RNA binding
FPKM:2.38 TPM:2.00
495 A_TrvaMG_comp11284_c0_seq1
506bp
cytidine_deaminase_[Bacteroides_paurosaccharolyticus]
FPKM:2.95 TPM:2.48
496 A_TrvaMG_comp11285_c0_seq1
296bp
hybrid_sensor_histidine_kinase/response_regulator_[Paenibacillus_wulumuqiensis]
FPKM:2.80 TPM:2.36
497 A_TrvaMG_comp11286_c0_seq1
1349bp
PREDICTED:_hyaluronidase-like_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004415 F hyalurononglucosaminidase activity
GO:0005576 C extracellular region
GO:0005975 P carbohydrate metabolic process
GO:0006952 P defense response
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
FPKM:2.35 TPM:1.98
498 A_TrvaMG_comp112876_c0_seq1
235bp
FPKM:2.63 TPM:2.21
499 A_TrvaMG_comp112879_c0_seq1
382bp
hypothetical_protein_HMPREF9244_00117_[Alloscardovia_omnicolens_F0580]
FPKM:3.22 TPM:2.71
500 A_TrvaMG_comp11287_c0_seq1
1307bp
PREDICTED:_uncharacterized_protein_LOC105391518_[Plutella_xylostella]
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0016591 C RNA polymerase II, holoenzyme
GO:0032774 P RNA biosynthetic process
GO:0035556 P intracellular signal transduction
GO:0051685 P maintenance of ER location
FPKM:2.46 TPM:2.07
501 A_TrvaMG_comp11288_c0_seq1
220bp
FPKM:1.82 TPM:1.53
502 A_TrvaMG_comp1128985_c0_seq1
341bp
PREDICTED:_uncharacterized_protein_LOC106108411_[Papilio_polytes]
FPKM:0.33 TPM:0.28
503 A_TrvaMG_comp11289_c0_seq1
734bp
PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_16_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
FPKM:2.47 TPM:2.08
504 A_TrvaMG_comp11290_c0_seq1
1754bp
PREDICTED:_rab-like_protein_6_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
FPKM:2.06 TPM:1.73
505 A_TrvaMG_comp11291_c0_seq1
1639bp
neuropeptide_receptor_A20_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:2.50 TPM:2.11
506 A_TrvaMG_comp11292_c0_seq1
413bp
potassium_transporter_KefB_[Methanosphaerula_palustris]
FPKM:2.83 TPM:2.38
507 A_TrvaMG_comp11295_c0_seq1
1010bp
PREDICTED:_uncharacterized_protein_C17orf59_homolog_isoform_X1_[Bombyx_mori]
FPKM:2.10 TPM:1.77
508 A_TrvaMG_comp11296_c0_seq1
1539bp
PREDICTED:_serine/threonine-protein_kinase_PLK4_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
FPKM:1.76 TPM:1.48
509 A_TrvaMG_comp11296_c1_seq1
556bp
Serine/threonine-protein_kinase_PLK4_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
FPKM:2.20 TPM:1.85
510 A_TrvaMG_comp11297_c0_seq1
649bp
PREDICTED:_zinc_finger_protein_26-like_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
FPKM:1.73 TPM:1.45
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