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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
151 A_TrvaMG_comp1030212_c0_seq1
220bp
PREDICTED:_uncharacterized_protein_LOC101743060_[Bombyx_mori]
FPKM:1.37 TPM:1.15
152 A_TrvaMG_comp1030255_c0_seq1
352bp
PREDICTED:_glucoside_xylosyltransferase_1_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016266 P O-glycan processing
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016763 F pentosyltransferase activity
GO:0035252 F UDP-xylosyltransferase activity
FPKM:0.62 TPM:0.52
153 A_TrvaMG_comp103047_c0_seq1
1529bp
uncharacterized_protein_LOC106122233_precursor_[Papilio_xuthus]
FPKM:6.56 TPM:5.53
154 A_TrvaMG_comp10308_c0_seq1
310bp
hypothetical_protein_[Actinoplanes_subtropicus]
FPKM:0.79 TPM:0.66
155 A_TrvaMG_comp1030901_c0_seq1
206bp
FPKM:0.56 TPM:0.48
156 A_TrvaMG_comp1031033_c0_seq1
245bp
FPKM:1.01 TPM:0.85
157 A_TrvaMG_comp103131_c0_seq1
1558bp
PREDICTED:_eIF2B-gamma_protein_isoform_X1_[Bombyx_mori]
GO:0003743 F translation initiation factor activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005851 C eukaryotic translation initiation factor 2B complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0008135 F translation factor activity, RNA binding
GO:0009058 P biosynthetic process
GO:0014003 P oligodendrocyte development
GO:0016779 F nucleotidyltransferase activity
GO:0043547 P positive regulation of GTPase activity
GO:0051716 P cellular response to stimulus
FPKM:8.93 TPM:7.51
158 A_TrvaMG_comp103139_c0_seq1
771bp
FPKM:7.32 TPM:6.16
159 A_TrvaMG_comp1031811_c0_seq1
233bp
hypothetical_protein_UX28_C0003G0131_[Candidatus_Pacebacteria_bacterium_GW2011_GWA1_46_10]
FPKM:0.77 TPM:0.65
160 A_TrvaMG_comp103220_c0_seq1
1536bp
FPKM:5.54 TPM:4.66
161 A_TrvaMG_comp10327_c0_seq1
254bp
PREDICTED:_protein_MCM10_homolog_[Papilio_xuthus]
FPKM:0.92 TPM:0.77
162 A_TrvaMG_comp103297_c0_seq1
566bp
FPKM:9.63 TPM:8.11
163 A_TrvaMG_comp1032_c0_seq1
233bp
PREDICTED:_origin_recognition_complex_subunit_4-like_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000808 C origin recognition complex
GO:0003677 F DNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005664 C nuclear origin of replication recognition complex
GO:0006260 P DNA replication
FPKM:1.15 TPM:0.97
164 A_TrvaMG_comp103300_c0_seq1
1894bp
PREDICTED:_ATP-dependent_RNA_helicase_dbp9_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
FPKM:8.34 TPM:7.02
165 A_TrvaMG_comp1033054_c0_seq1
209bp
hypothetical_protein_[Podospora_anserina_S_mat+]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004825 F methionine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006431 P methionyl-tRNA aminoacylation
GO:0016874 F ligase activity
FPKM:1.61 TPM:1.36
166 A_TrvaMG_comp1033769_c0_seq1
216bp
FPKM:1.93 TPM:1.62
167 A_TrvaMG_comp1033828_c0_seq1
250bp
hypothetical_protein_[Bacillus_endophyticus]
FPKM:0.95 TPM:0.80
168 A_TrvaMG_comp1034940_c0_seq1
351bp
PREDICTED:_glucuronyltransferase_isoform_X1_[Bombyx_mori]
FPKM:1.09 TPM:0.92
169 A_TrvaMG_comp1035524_c0_seq1
293bp
putative_zinc_finger_protein,_partial_[Operophtera_brumata]
FPKM:1.10 TPM:0.93
170 A_TrvaMG_comp103557_c0_seq1
1059bp
FPKM:6.03 TPM:5.08
171 A_TrvaMG_comp1035720_c0_seq1
255bp
FPKM:1.21 TPM:1.02
172 A_TrvaMG_comp1035754_c0_seq1
232bp
hypothetical_protein_CAEBREN_02258_[Caenorhabditis_brenneri]
FPKM:1.17 TPM:0.98
173 A_TrvaMG_comp1035763_c0_seq1
208bp
Endoprotease_FURIN,_partial_[Operophtera_brumata]
GO:0004252 F serine-type endopeptidase activity
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0010906 P regulation of glucose metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0051048 P negative regulation of secretion
FPKM:1.09 TPM:0.92
174 A_TrvaMG_comp1036088_c0_seq1
260bp
PREDICTED:_insulin-like_receptor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000187 P obsolete activation of MAPK activity
GO:0001933 P negative regulation of protein phosphorylation
GO:0001934 P positive regulation of protein phosphorylation
GO:0003007 P heart morphogenesis
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0004716 F obsolete signal transducer, downstream of receptor, with protein tyrosine kinase activity
GO:0005009 F insulin-activated receptor activity
GO:0005159 F insulin-like growth factor receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005899 C insulin receptor complex
GO:0005901 C caveola
GO:0005975 P carbohydrate metabolic process
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008284 P positive regulation of cell population proliferation
GO:0008286 P insulin receptor signaling pathway
GO:0008544 P epidermis development
GO:0008584 P male gonad development
GO:0009725 P response to hormone
GO:0009887 P animal organ morphogenesis
GO:0010008 C endosome membrane
GO:0010042 P response to manganese ion
GO:0010310 P regulation of hydrogen peroxide metabolic process
GO:0010560 P positive regulation of glycoprotein biosynthetic process
GO:0010629 P negative regulation of gene expression
GO:0014823 P response to activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0019087 P transformation of host cell by virus
GO:0019901 F protein kinase binding
GO:0019903 F protein phosphatase binding
GO:0019904 F protein domain specific binding
GO:0023014 P signal transduction
GO:0030238 P male sex determination
GO:0030325 P adrenal gland development
GO:0030335 P positive regulation of cell migration
GO:0031017 P exocrine pancreas development
GO:0031405 F lipoic acid binding
GO:0031667 P response to nutrient levels
GO:0031994 F insulin-like growth factor I binding
GO:0031995 F insulin-like growth factor II binding
GO:0032147 P activation of protein kinase activity
GO:0032148 P activation of protein kinase B activity
GO:0032355 P response to estradiol
GO:0032403 F protein-containing complex binding
GO:0032410 P negative regulation of transporter activity
GO:0032868 P response to insulin
GO:0032869 P cellular response to insulin stimulus
GO:0033280 P response to vitamin D
GO:0033574 P response to testosterone
GO:0034612 P response to tumor necrosis factor
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042593 P glucose homeostasis
GO:0043231 C intracellular membrane-bounded organelle
GO:0043235 C receptor complex
GO:0043410 P positive regulation of MAPK cascade
GO:0043423 F 3-phosphoinositide-dependent protein kinase binding
GO:0043548 F phosphatidylinositol 3-kinase binding
GO:0043559 F insulin binding
GO:0043560 F insulin receptor substrate binding
GO:0045202 C synapse
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0045444 P fat cell differentiation
GO:0045471 P response to ethanol
GO:0045725 P positive regulation of glycogen biosynthetic process
GO:0045740 P positive regulation of DNA replication
GO:0045821 P positive regulation of glycolytic process
GO:0045840 P positive regulation of mitotic nuclear division
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045995 P regulation of embryonic development
GO:0046326 P positive regulation of glucose import
GO:0046777 P protein autophosphorylation
GO:0048639 P positive regulation of developmental growth
GO:0051290 P protein heterotetramerization
GO:0051384 P response to glucocorticoid
GO:0051425 F PTB domain binding
GO:0051446 P positive regulation of meiotic cell cycle
GO:0051897 P positive regulation of protein kinase B signaling
GO:0060267 P positive regulation of respiratory burst
GO:0070062 C extracellular exosome
GO:0071363 P cellular response to growth factor stimulus
GO:2000194 P regulation of female gonad development
FPKM:0.87 TPM:0.73
175 A_TrvaMG_comp1036537_c0_seq1
253bp
FPKM:1.23 TPM:1.04
176 A_TrvaMG_comp103653_c0_seq1
878bp
PREDICTED:_26S_proteasome_non-ATPase_regulatory_subunit_10-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007253 P cytoplasmic sequestering of NF-kappaB
GO:0008134 F transcription factor binding
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0030307 P positive regulation of cell growth
GO:0031398 P positive regulation of protein ubiquitination
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0043066 P negative regulation of apoptotic process
GO:0043409 P negative regulation of MAPK cascade
GO:0043518 P negative regulation of DNA damage response, signal transduction by p53 class mediator
GO:0045111 C intermediate filament cytoskeleton
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0070682 P proteasome regulatory particle assembly
GO:0090201 P negative regulation of release of cytochrome c from mitochondria
FPKM:7.08 TPM:5.96
177 A_TrvaMG_comp1036626_c0_seq1
545bp
PREDICTED:_WD_repeat-containing_protein_19_isoform_X3_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001701 P in utero embryonic development
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0008406 P gonad development
GO:0030030 P cell projection organization
GO:0030326 P embryonic limb morphogenesis
GO:0030991 C intraciliary transport particle A
GO:0031076 P embryonic camera-type eye development
GO:0031513 C non-motile cilium
GO:0031514 C motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042471 P ear morphogenesis
GO:0042995 C cell projection
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0050877 P nervous system process
GO:0055123 P digestive system development
GO:0060271 P cilium assembly
GO:0060830 P ciliary receptor clustering involved in smoothened signaling pathway
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0061055 P myotome development
GO:0061512 P protein localization to cilium
FPKM:0.78 TPM:0.66
178 A_TrvaMG_comp1036_c0_seq1
256bp
FPKM:0.60 TPM:0.50
179 A_TrvaMG_comp1037107_c0_seq1
230bp
DNA_polymerase_III_subunit_gamma/tau_[Lactobacillus_suebicus]
FPKM:1.20 TPM:1.01
180 A_TrvaMG_comp1037113_c0_seq1
210bp
reverse_transcriptase_[Bombyx_mori]
FPKM:1.59 TPM:1.34
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