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Last updated: 2022/11/18

Search Assembled RNA-Seq

next from show/37360
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1 A_TrvaMG_comp100000_c0_seq1
608bp
PREDICTED:_leucine-rich_repeat_transmembrane_neuronal_protein_4-like_[Solenopsis_invicta]
FPKM:9.08 TPM:7.64
2 A_TrvaMG_comp1000286_c0_seq1
293bp
FPKM:0.44 TPM:0.37
3 A_TrvaMG_comp1000302_c0_seq1
203bp
FPKM:1.19 TPM:1.00
4 A_TrvaMG_comp100035_c0_seq1
297bp
FPKM:4.50 TPM:3.79
5 A_TrvaMG_comp1000655_c0_seq1
271bp
FPKM:1.05 TPM:0.88
6 A_TrvaMG_comp1000985_c0_seq1
227bp
putative_cuticle_protein_CPH41_[Bombyx_mori]
FPKM:0.83 TPM:0.70
7 A_TrvaMG_comp1001422_c0_seq1
279bp
FPKM:0.98 TPM:0.82
8 A_TrvaMG_comp1001532_c0_seq1
213bp
FPKM:1.01 TPM:0.85
9 A_TrvaMG_comp1001644_c0_seq1
312bp
PREDICTED:_rho_GTPase-activating_protein_7_[Bombyx_mori]
GO:0001843 P neural tube closure
GO:0003007 P heart morphogenesis
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005901 C caveola
GO:0005925 C focal adhesion
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0007165 P signal transduction
GO:0008285 P negative regulation of cell population proliferation
GO:0008289 F lipid binding
GO:0008360 P regulation of cell shape
GO:0016020 C membrane
GO:0021575 P hindbrain morphogenesis
GO:0030036 P actin cytoskeleton organization
GO:0030054 C cell junction
GO:0030336 P negative regulation of cell migration
GO:0030864 C cortical actin cytoskeleton
GO:0030900 P forebrain development
GO:0032587 C ruffle membrane
GO:0032956 P regulation of actin cytoskeleton organization
GO:0035023 P regulation of Rho protein signal transduction
GO:0035024 P negative regulation of Rho protein signal transduction
GO:0035307 P positive regulation of protein dephosphorylation
GO:0042169 F SH2 domain binding
GO:0043547 P positive regulation of GTPase activity
GO:0048041 P focal adhesion assembly
GO:0051497 P negative regulation of stress fiber assembly
GO:0051895 P negative regulation of focal adhesion assembly
GO:1900119 P positive regulation of execution phase of apoptosis
FPKM:0.97 TPM:0.82
10 A_TrvaMG_comp1001699_c0_seq1
208bp
PREDICTED:_adhesion_G_protein-coupled_receptor_A3_[Amyelois_transitella]
FPKM:1.64 TPM:1.38
11 A_TrvaMG_comp1001742_c0_seq1
233bp
FPKM:1.15 TPM:0.97
12 A_TrvaMG_comp100186_c0_seq1
509bp
hypothetical_protein_Z517_08203_[Fonsecaea_pedrosoi_CBS_271.37]
FPKM:9.38 TPM:7.89
13 A_TrvaMG_comp1001923_c0_seq1
210bp
hypothetical_protein_[Sporichthya_polymorpha]
FPKM:1.06 TPM:0.89
14 A_TrvaMG_comp100236_c0_seq1
413bp
FPKM:6.73 TPM:5.66
15 A_TrvaMG_comp1002509_c0_seq1
233bp
PREDICTED:_ral_GTPase-activating_protein_subunit_beta-like_[Bombyx_mori]
FPKM:1.54 TPM:1.29
16 A_TrvaMG_comp1003262_c0_seq1
224bp
FPKM:1.29 TPM:1.09
17 A_TrvaMG_comp1003331_c0_seq1
268bp
neuropeptide_receptor_A26_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005000 F vasopressin receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007218 P neuropeptide signaling pathway
GO:0008188 F neuropeptide receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0018990 P ecdysis, chitin-based cuticle
FPKM:1.07 TPM:0.90
18 A_TrvaMG_comp100334_c0_seq1
404bp
FPKM:2.08 TPM:1.75
19 A_TrvaMG_comp100361_c0_seq1
874bp
FPKM:6.91 TPM:5.81
20 A_TrvaMG_comp1003860_c0_seq1
259bp
PREDICTED:_serine/threonine-protein_kinase_greatwall_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007147 P female meiosis II
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018105 P peptidyl-serine phosphorylation
GO:0032154 C cleavage furrow
GO:0034048 P negative regulation of phosphoprotein phosphatase activity
GO:0035556 P intracellular signal transduction
GO:0051301 P cell division
GO:0051487 P obsolete positive regulation of ubiquitin-protein ligase activity involved in meiotic cell cycle
GO:0051721 F protein phosphatase 2A binding
GO:0051726 P regulation of cell cycle
FPKM:1.17 TPM:0.98
21 A_TrvaMG_comp1003934_c0_seq1
320bp
FPKM:0.74 TPM:0.62
22 A_TrvaMG_comp1004066_c0_seq1
209bp
PREDICTED:_DNA_replication_ATP-dependent_helicase/nuclease_DNA2_[Amyelois_transitella]
FPKM:1.61 TPM:1.36
23 A_TrvaMG_comp1004209_c0_seq1
273bp
FPKM:1.03 TPM:0.87
24 A_TrvaMG_comp1004251_c0_seq1
309bp
PREDICTED:_uncharacterized_protein_LOC105842099_[Bombyx_mori]
FPKM:0.99 TPM:0.83
25 A_TrvaMG_comp100427_c0_seq1
1548bp
PREDICTED:_Golgi_to_ER_traffic_protein_4_homolog_[Amyelois_transitella]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0045048 P protein insertion into ER membrane
GO:0071816 P tail-anchored membrane protein insertion into ER membrane
GO:0071818 C BAT3 complex
FPKM:8.53 TPM:7.18
26 A_TrvaMG_comp100429_c0_seq1
534bp
PREDICTED:_39S_ribosomal_protein_L14,_mitochondrial_[Plutella_xylostella]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
FPKM:13.10 TPM:11.03
27 A_TrvaMG_comp1004487_c0_seq1
244bp
low_molecular_30_kDa_lipoprotein_PBMHP-12-like_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005615 C extracellular space
FPKM:1.36 TPM:1.14
28 A_TrvaMG_comp1004548_c0_seq1
201bp
FPKM:1.23 TPM:1.04
29 A_TrvaMG_comp1004769_c0_seq1
212bp
hypothetical_protein_EDEG_02220_[Edhazardia_aedis_USNM_41457]
FPKM:1.54 TPM:1.29
30 A_TrvaMG_comp1004870_c0_seq1
308bp
FPKM:1.19 TPM:1.00
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