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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
121 A_ErmoMG_comp1077255_c0_seq1
253bp
Sulfotransferase_family_cytosolic_1B_member_1_[Papilio_machaon]
GO:0005737 C cytoplasm
GO:0006629 P lipid metabolic process
GO:0006790 P sulfur compound metabolic process
GO:0008146 F sulfotransferase activity
GO:0008202 P steroid metabolic process
GO:0016740 F transferase activity
FPKM:1.33 TPM:0.98
122 A_ErmoMG_comp107762_c0_seq1
212bp
FPKM:2.60 TPM:1.91
123 A_ErmoMG_comp1078063_c0_seq1
228bp
PREDICTED:_unconventional_myosin-Ih-like,_partial_[Bombyx_mori]
FPKM:1.28 TPM:0.94
124 A_ErmoMG_comp1079354_c0_seq1
217bp
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Papilio_machaon]
FPKM:1.46 TPM:1.07
125 A_ErmoMG_comp1081940_c0_seq1
207bp
FPKM:0.56 TPM:0.41
126 A_ErmoMG_comp1083580_c0_seq1
260bp
PREDICTED:_uncharacterized_protein_LOC101743391_[Bombyx_mori]
FPKM:0.94 TPM:0.69
127 A_ErmoMG_comp108439_c0_seq1
1234bp
PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_13_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0004252 F serine-type endopeptidase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045165 P cell fate commitment
GO:0045498 P sex comb development
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
FPKM:7.41 TPM:5.45
128 A_ErmoMG_comp108572_c0_seq1
1086bp
PREDICTED:_protein_dpy-30_homolog_[Papilio_polytes]
GO:0000781 C chromosome, telomeric region
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006348 P subtelomeric heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016197 P endosomal transport
GO:0016568 P chromatin organization
GO:0035097 C histone methyltransferase complex
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044666 C MLL3/4 complex
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
FPKM:7.74 TPM:5.69
129 A_ErmoMG_comp108833_c0_seq1
385bp
PREDICTED:_uncharacterized_protein_LOC105841582_[Bombyx_mori]
FPKM:10.69 TPM:7.87
130 A_ErmoMG_comp1088403_c0_seq1
218bp
FPKM:1.44 TPM:1.06
131 A_ErmoMG_comp1088477_c0_seq1
224bp
PREDICTED:_uncharacterized_protein_LOC105841900_[Bombyx_mori]
FPKM:0.89 TPM:0.66
132 A_ErmoMG_comp109503_c0_seq1
266bp
FPKM:4.17 TPM:3.07
133 A_ErmoMG_comp11000_c0_seq1
210bp
PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX27_[Bombyx_mori]
FPKM:0.53 TPM:0.39
134 A_ErmoMG_comp1100651_c0_seq1
217bp
FPKM:1.46 TPM:1.07
135 A_ErmoMG_comp110228_c0_seq1
280bp
PREDICTED:_U6_snRNA-associated_Sm-like_protein_LSm6_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005688 C U6 snRNP
GO:0005730 C nucleolus
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006402 P mRNA catabolic process
GO:0008033 P tRNA processing
GO:0008380 P RNA splicing
GO:0030490 P maturation of SSU-rRNA
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0046982 F protein heterodimerization activity
GO:0070062 C extracellular exosome
FPKM:13.13 TPM:9.66
136 A_ErmoMG_comp110326_c0_seq1
212bp
FPKM:3.11 TPM:2.29
137 A_ErmoMG_comp110521_c0_seq1
211bp
PREDICTED:_tubulin_beta_chain,_partial_[Buceros_rhinoceros_silvestris]
GO:0000166 F nucleotide binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007017 P microtubule-based process
FPKM:2.11 TPM:1.55
138 A_ErmoMG_comp11052_c0_seq1
220bp
FPKM:1.40 TPM:1.03
139 A_ErmoMG_comp110548_c0_seq1
821bp
FPKM:6.64 TPM:4.88
140 A_ErmoMG_comp1107046_c0_seq1
242bp
FPKM:0.74 TPM:0.54
141 A_ErmoMG_comp1108995_c0_seq1
221bp
hypothetical_protein_ALC56_07955_[Trachymyrmex_septentrionalis]
FPKM:1.39 TPM:1.02
142 A_ErmoMG_comp110913_c0_seq1
955bp
PREDICTED:_regulator_of_gene_activity-like_isoform_X2_[Papilio_xuthus]
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000932 C P-body
GO:0004535 F poly(A)-specific ribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006402 P mRNA catabolic process
GO:0006417 P regulation of translation
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0017148 P negative regulation of translation
GO:0019233 P sensory perception of pain
GO:0030014 C CCR4-NOT complex
GO:0030015 C CCR4-NOT core complex
GO:0031047 P gene silencing by RNA
GO:0046331 P lateral inhibition
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
FPKM:7.19 TPM:5.29
143 A_ErmoMG_comp110919_c0_seq1
222bp
FPKM:7.77 TPM:5.72
144 A_ErmoMG_comp1111623_c0_seq1
225bp
PREDICTED:_facilitated_trehalose_transporter_Tret1-like_[Amyelois_transitella]
FPKM:0.88 TPM:0.65
145 A_ErmoMG_comp111248_c0_seq1
347bp
FPKM:2.17 TPM:1.60
146 A_ErmoMG_comp111341_c0_seq1
648bp
putative_mitochondrial_ribosomal_protein_l49_[Operophtera_brumata]
GO:0003735 F structural constituent of ribosome
GO:0003743 F translation initiation factor activity
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
FPKM:10.30 TPM:7.58
147 A_ErmoMG_comp111477_c0_seq1
217bp
FPKM:6.81 TPM:5.01
148 A_ErmoMG_comp1116397_c0_seq1
225bp
FPKM:0.88 TPM:0.65
149 A_ErmoMG_comp1119982_c0_seq1
219bp
FPKM:0.95 TPM:0.70
150 A_ErmoMG_comp112140_c0_seq1
642bp
actin_related_protein_2/3_complex_subunit_4_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005885 C Arp2/3 protein complex
GO:0015629 C actin cytoskeleton
GO:0019899 F enzyme binding
GO:0030041 P actin filament polymerization
GO:0030674 F protein-macromolecule adaptor activity
GO:0034314 P Arp2/3 complex-mediated actin nucleation
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
FPKM:9.68 TPM:7.12
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