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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
601 A_BomoMG_comp136410_c0_seq1
348bp
FPKM:1.11 TPM:0.88
602 A_BomoMG_comp136545_c0_seq1
583bp
FPKM:6.30 TPM:4.98
603 A_BomoMG_comp136562_c0_seq1
517bp
FPKM:5.52 TPM:4.36
604 A_BomoMG_comp136609_c0_seq1
1217bp
FPKM:5.72 TPM:4.52
605 A_BomoMG_comp136666_c0_seq1
1038bp
 PREDICTED:_uncharacterized_protein_LOC101736494_[Bombyx_mori]
FPKM:5.04 TPM:3.98
606 A_BomoMG_comp136724_c0_seq1
337bp
 hypothetical_protein_KGM_11568_[Danaus_plexippus]
FPKM:8.82 TPM:6.97
607 A_BomoMG_comp136802_c0_seq1
1164bp
FPKM:5.18 TPM:4.09
608 A_BomoMG_comp136853_c0_seq1
2258bp
 PREDICTED:_exocyst_complex_component_5_isoform_X1_[Papilio_machaon]
GO:0000145 C exocyst
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0007269 P neurotransmitter secretion
GO:0008013 F beta-catenin binding
GO:0015031 P protein transport
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0048278 P vesicle docking
GO:0090522 P vesicle tethering involved in exocytosis
GO:0098793 C presynapse
FPKM:3.30 TPM:2.61
609 A_BomoMG_comp136938_c0_seq1
465bp
FPKM:0.94 TPM:0.74
610 A_BomoMG_comp137075_c0_seq1
309bp
FPKM:4.14 TPM:3.27
611 A_BomoMG_comp137119_c0_seq1
1030bp
 PREDICTED:_uncharacterized_protein_LOC105390855_[Plutella_xylostella]
GO:0000287 F magnesium ion binding
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008853 F exodeoxyribonuclease III activity
GO:0016787 F hydrolase activity
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:4.41 TPM:3.49
612 A_BomoMG_comp137135_c0_seq1
729bp
 PREDICTED:_iduronate_2-sulfatase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004423 F iduronate-2-sulfatase activity
GO:0005764 C lysosome
GO:0006027 P glycosaminoglycan catabolic process
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016787 F hydrolase activity
GO:0030207 P chondroitin sulfate catabolic process
GO:0043202 C lysosomal lumen
GO:0046872 F metal ion binding
FPKM:2.87 TPM:2.27
613 A_BomoMG_comp137224_c0_seq1
264bp
FPKM:7.02 TPM:5.54
614 A_BomoMG_comp137235_c0_seq1
1089bp
FPKM:3.35 TPM:2.65
615 A_BomoMG_comp137279_c0_seq1
255bp
 hypothetical_protein_MELLADRAFT_32431_[Melampsora_larici-populina_98AG31]
FPKM:4.84 TPM:3.82
616 A_BomoMG_comp137296_c0_seq1
524bp
 Actin-like_protein_6A_[Papilio_machaon]
GO:0000790 C chromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003407 P neural retina development
GO:0003682 F chromatin binding
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0016514 C SWI/SNF complex
GO:0016568 P chromatin organization
GO:0021510 P spinal cord development
GO:0031011 C Ino80 complex
GO:0031492 F nucleosomal DNA binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043044 P chromatin remodeling
GO:0043234 C protein-containing complex
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0071564 C npBAF complex
GO:0090544 C SWI/SNF superfamily-type complex
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903955 P positive regulation of protein targeting to mitochondrion
FPKM:7.20 TPM:5.68
617 A_BomoMG_comp137309_c0_seq1
695bp
 hypothetical_protein_KGM_02361_[Danaus_plexippus]
FPKM:5.28 TPM:4.18
618 A_BomoMG_comp137333_c0_seq1
408bp
 hypothetical_protein_EPUS_04647_[Endocarpon_pusillum_Z07020]
FPKM:8.55 TPM:6.76
619 A_BomoMG_comp137439_c0_seq1
559bp
 acyl-CoA_thioesterase_13_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0047617 F acyl-CoA hydrolase activity
GO:0051289 P protein homotetramerization
GO:0070062 C extracellular exosome
FPKM:5.59 TPM:4.42
620 A_BomoMG_comp137566_c0_seq1
284bp
FPKM:3.81 TPM:3.01
621 A_BomoMG_comp137574_c0_seq1
1098bp
 putative_ankyrin_repeat_domain_54_[Danaus_plexippus]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006913 P nucleocytoplasmic transport
GO:0019887 F protein kinase regulator activity
GO:0030496 C midbody
GO:0032403 F protein-containing complex binding
GO:0045648 P positive regulation of erythrocyte differentiation
GO:0045859 P regulation of protein kinase activity
GO:1902531 P regulation of intracellular signal transduction
FPKM:3.63 TPM:2.87
622 A_BomoMG_comp137604_c0_seq1
1861bp
 PREDICTED:_uridine-cytidine_kinase-like_1_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004849 F uridine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006206 P pyrimidine nucleobase metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0043097 P pyrimidine nucleoside salvage
GO:0044206 P UMP salvage
FPKM:3.35 TPM:2.65
623 A_BomoMG_comp137623_c0_seq1
271bp
 hypothetical_protein_[Cetobacterium_somerae]
FPKM:1.50 TPM:1.19
624 A_BomoMG_comp137652_c0_seq1
490bp
 14_kDa_subunit_splicing_factor_3b_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0001825 P blastocyst formation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0005689 C U12-type spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:5.96 TPM:4.71
625 A_BomoMG_comp137687_c0_seq1
206bp
FPKM:3.73 TPM:2.95
626 A_BomoMG_comp137744_c0_seq1
305bp
FPKM:5.19 TPM:4.10
627 A_BomoMG_comp137792_c0_seq1
387bp
FPKM:3.72 TPM:2.94
628 A_BomoMG_comp137847_c0_seq1
219bp
 PREDICTED:_ubiquitin-conjugating_enzyme_E2_U_[Aotus_nancymaae]
FPKM:1.54 TPM:1.22
629 A_BomoMG_comp137911_c0_seq1
548bp
 hypothetical_protein_KGM_11337_[Danaus_plexippus]
FPKM:4.91 TPM:3.88
630 A_BomoMG_comp137958_c0_seq1
238bp
FPKM:0.82 TPM:0.65
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