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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3241 A_BomoMG_comp188608_c0_seq1
747bp
FPKM:2.23 TPM:1.76
3242 A_BomoMG_comp188618_c0_seq1
306bp
FPKM:4.45 TPM:3.52
3243 A_BomoMG_comp18864_c0_seq1
348bp
 Contactin_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005886 C plasma membrane
GO:0005918 C septate junction
GO:0007155 P cell adhesion
GO:0008366 P axon ensheathment
GO:0016020 C membrane
GO:0019991 P septate junction assembly
GO:0021682 P nerve maturation
GO:0030054 C cell junction
GO:0031225 C anchored component of membrane
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0060857 P establishment of glial blood-brain barrier
GO:0061343 P cell adhesion involved in heart morphogenesis
FPKM:2.22 TPM:1.76
3244 A_BomoMG_comp18866_c0_seq1
876bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737263_[Bombyx_mori]
GO:0000785 C chromatin
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0010906 P regulation of glucose metabolic process
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018991 P oviposition
GO:0032259 P methylation
GO:0034770 P histone H4-K20 methylation
GO:0035035 F histone acetyltransferase binding
GO:0042054 F histone methyltransferase activity
GO:0042799 F histone methyltransferase activity (H4-K20 specific)
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0048477 P oogenesis
GO:0051567 P histone H3-K9 methylation
GO:0051568 P histone H3-K4 methylation
FPKM:1.99 TPM:1.57
3245 A_BomoMG_comp18866_c1_seq1
313bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101737263_[Bombyx_mori]
GO:0002674 P negative regulation of acute inflammatory response
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005923 C bicellular tight junction
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030054 C cell junction
GO:0032259 P methylation
GO:0032635 P interleukin-6 production
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0043124 P negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043409 P negative regulation of MAPK cascade
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0050728 P negative regulation of inflammatory response
GO:0051568 P histone H3-K4 methylation
GO:0070062 C extracellular exosome
GO:0097676 P histone H3-K36 dimethylation
FPKM:2.02 TPM:1.60
3246 A_BomoMG_comp188670_c0_seq1
451bp
FPKM:2.94 TPM:2.32
3247 A_BomoMG_comp18867_c0_seq1
247bp
FPKM:1.49 TPM:1.18
3248 A_BomoMG_comp18867_c0_seq2
246bp
 PREDICTED:_myosin-IIIa_[Merops_nubicus]
FPKM:0.00 TPM:0.00
3249 A_BomoMG_comp18867_c1_seq1
335bp
 hypothetical_protein_[Rhodoferax_saidenbachensis]
FPKM:2.38 TPM:1.88
3250 A_BomoMG_comp18870_c0_seq1
244bp
 Mariner_Mos1_transposase_[Acromyrmex_echinatior]
FPKM:4.23 TPM:3.34
3251 A_BomoMG_comp18871_c0_seq1
406bp
 PREDICTED:_DENN_domain-containing_protein_1B-like_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0015031 P protein transport
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0032456 P endocytic recycling
GO:0035745 P T-helper 2 cell cytokine production
GO:0043547 P positive regulation of GTPase activity
GO:0050776 P regulation of immune response
GO:0050852 P T cell receptor signaling pathway
FPKM:2.30 TPM:1.82
3252 A_BomoMG_comp18874_c0_seq1
259bp
 hypothetical_protein_RR46_04905_[Papilio_xuthus]
FPKM:2.00 TPM:1.58
3253 A_BomoMG_comp18874_c1_seq1
627bp
 PREDICTED:_uncharacterized_protein_C3orf17_[Papilio_machaon]
FPKM:2.32 TPM:1.83
3254 A_BomoMG_comp18875_c0_seq1
464bp
FPKM:2.81 TPM:2.22
3255 A_BomoMG_comp18875_c1_seq1
287bp
FPKM:2.93 TPM:2.32
3256 A_BomoMG_comp18876_c0_seq1
530bp
 hypothetical_protein_RR46_13561_[Papilio_xuthus]
FPKM:1.84 TPM:1.46
3257 A_BomoMG_comp18879_c0_seq1
210bp
 hypothetical_protein_AN958_06006_[Leucoagaricus_sp._SymC.cos]
FPKM:4.68 TPM:3.70
3258 A_BomoMG_comp188804_c0_seq1
208bp
 PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_8-like_[Bombyx_mori]
FPKM:0.60 TPM:0.48
3259 A_BomoMG_comp18880_c0_seq1
368bp
FPKM:2.36 TPM:1.86
3260 A_BomoMG_comp188813_c0_seq1
264bp
 Tubulin_binding_cofactor_C_domain-containing_protein_[Arabidopsis_thaliana]
FPKM:4.78 TPM:3.78
3261 A_BomoMG_comp18881_c0_seq1
263bp
 PREDICTED:_uncharacterized_protein_LOC103309040_[Acyrthosiphon_pisum]
FPKM:2.57 TPM:2.03
3262 A_BomoMG_comp188834_c0_seq1
1115bp
 PREDICTED:_coiled-coil_domain-containing_protein_94_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:3.26 TPM:2.57
3263 A_BomoMG_comp18883_c0_seq1
368bp
FPKM:2.02 TPM:1.60
3264 A_BomoMG_comp18884_c0_seq1
951bp
 PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
FPKM:1.75 TPM:1.39
3265 A_BomoMG_comp18885_c0_seq1
378bp
 Uncharacterized_protein_OBRU01_04974_[Operophtera_brumata]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004818 F glutamate-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006424 P glutamyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
FPKM:1.93 TPM:1.53
3266 A_BomoMG_comp18886_c0_seq1
203bp
FPKM:5.87 TPM:4.64
3267 A_BomoMG_comp18887_c0_seq1
310bp
 hypothetical_protein_SMAC_05929_[Sordaria_macrospora_k-hell]
FPKM:2.97 TPM:2.35
3268 A_BomoMG_comp18888_c0_seq1
302bp
FPKM:4.81 TPM:3.80
3269 A_BomoMG_comp18890_c0_seq1
308bp
 Gag_protein_[Bombyx_mori]
FPKM:2.78 TPM:2.20
3270 A_BomoMG_comp18891_c0_seq1
221bp
 PREDICTED:_anaphase-promoting_complex_subunit_1-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005680 C anaphase-promoting complex
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016567 P protein ubiquitination
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051301 P cell division
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0051439 P obsolete regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0070979 P protein K11-linked ubiquitination
FPKM:4.51 TPM:3.57
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