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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2311 A_BomoMG_comp178550_c0_seq1
705bp
FPKM:2.46 TPM:1.95
2312 A_BomoMG_comp178553_c0_seq1
443bp
 Protein_TAPT1-like_[Papilio_xuthus]
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:2.89 TPM:2.28
2313 A_BomoMG_comp178558_c0_seq1
384bp
FPKM:5.18 TPM:4.09
2314 A_BomoMG_comp178566_c0_seq1
806bp
FPKM:3.15 TPM:2.49
2315 A_BomoMG_comp17856_c0_seq1
356bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.49 TPM:1.97
2316 A_BomoMG_comp178572_c0_seq1
293bp
FPKM:3.83 TPM:3.03
2317 A_BomoMG_comp17857_c0_seq1
326bp
FPKM:1.04 TPM:0.82
2318 A_BomoMG_comp17858_c0_seq1
482bp
 PREDICTED:_ABC_transporter_F_family_member_4-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2319 A_BomoMG_comp17858_c0_seq2
465bp
 PREDICTED:_ABC_transporter_F_family_member_4-like_[Bombyx_mori]
FPKM:2.10 TPM:1.66
2320 A_BomoMG_comp178597_c0_seq1
691bp
 PREDICTED:_uncharacterized_protein_LOC106142086_[Amyelois_transitella]
FPKM:3.69 TPM:2.91
2321 A_BomoMG_comp17859_c0_seq1
266bp
FPKM:0.00 TPM:0.00
2322 A_BomoMG_comp17859_c0_seq2
304bp
FPKM:1.90 TPM:1.50
2323 A_BomoMG_comp17860_c0_seq1
308bp
FPKM:3.70 TPM:2.93
2324 A_BomoMG_comp178619_c0_seq1
212bp
 PREDICTED:_tropomyosin-2_isoform_X26_[Papilio_polytes]
FPKM:3.97 TPM:3.14
2325 A_BomoMG_comp17861_c0_seq1
446bp
FPKM:2.11 TPM:1.67
2326 A_BomoMG_comp178621_c0_seq1
345bp
FPKM:3.20 TPM:2.53
2327 A_BomoMG_comp17863_c0_seq1
624bp
 PREDICTED:_THAP_domain-containing_protein_1-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005730 C nucleolus
GO:0046872 F metal ion binding
FPKM:2.02 TPM:1.60
2328 A_BomoMG_comp17866_c0_seq1
419bp
FPKM:2.46 TPM:1.94
2329 A_BomoMG_comp17867_c0_seq1
276bp
FPKM:2.31 TPM:1.83
2330 A_BomoMG_comp17868_c0_seq1
233bp
 PREDICTED:_general_transcription_factor_IIH_subunit_1_[Bombyx_mori]
GO:0000439 C transcription factor TFIIH core complex
GO:0000990 F obsolete transcription factor activity, core RNA polymerase binding
GO:0001111 P promoter clearance from RNA polymerase II promoter
GO:0001113 P transcription open complex formation at RNA polymerase II promoter
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006974 P cellular response to DNA damage stimulus
GO:0009411 P response to UV
FPKM:3.46 TPM:2.74
2331 A_BomoMG_comp17869_c0_seq1
242bp
 hypothetical_protein,_partial_[Plasmodium_yoelii_yoelii_17XNL]
FPKM:2.36 TPM:1.86
2332 A_BomoMG_comp178704_c0_seq1
813bp
FPKM:2.90 TPM:2.29
2333 A_BomoMG_comp17870_c0_seq1
770bp
 putative_VPS9-ankyrin_repeat-containing_protein_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0042470 C melanosome
FPKM:1.25 TPM:0.99
2334 A_BomoMG_comp178711_c0_seq1
247bp
FPKM:4.10 TPM:3.24
2335 A_BomoMG_comp178717_c0_seq1
1028bp
 PREDICTED:_nuclear_factor_related_to_kappa-B-binding_protein_isoform_X3_[Bombyx_mori]
GO:0002020 F protease binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006954 P inflammatory response
GO:0006974 P cellular response to DNA damage stimulus
GO:0031011 C Ino80 complex
FPKM:2.53 TPM:2.00
2336 A_BomoMG_comp17871_c0_seq1
240bp
 PREDICTED:_coiled-coil_domain-containing_protein_93_[Bombyx_mori]
FPKM:2.41 TPM:1.90
2337 A_BomoMG_comp17873_c0_seq1
314bp
 PREDICTED:_gamma-tubulin_complex_component_2-like_isoform_X2_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0000922 C spindle pole
GO:0000923 C equatorial microtubule organizing center
GO:0005200 F structural constituent of cytoskeleton
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005816 C spindle pole body
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007126 P meiotic cell cycle
GO:0008275 C gamma-tubulin small complex
GO:0016020 C membrane
GO:0031122 P cytoplasmic microtubule organization
GO:0043015 F gamma-tubulin binding
GO:0051011 F microtubule minus-end binding
GO:0051298 P centrosome duplication
GO:0051415 P microtubule nucleation by interphase microtubule organizing center
GO:0090063 P positive regulation of microtubule nucleation
GO:0090307 P mitotic spindle assembly
FPKM:2.68 TPM:2.12
2338 A_BomoMG_comp178746_c0_seq1
742bp
 PREDICTED:_codanin-1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006325 P chromatin organization
GO:0008104 P protein localization
GO:0008156 P negative regulation of DNA replication
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031497 P chromatin assembly
FPKM:3.18 TPM:2.51
2339 A_BomoMG_comp17874_c0_seq1
258bp
FPKM:2.02 TPM:1.59
2340 A_BomoMG_comp17874_c1_seq1
216bp
FPKM:2.68 TPM:2.12
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