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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2131 A_BomoMG_comp17691_c0_seq1
347bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_two_pore_calcium_channel_protein_1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005575 C cellular_component
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0008150 P biological_process
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0055085 P transmembrane transport
GO:0070588 P calcium ion transmembrane transport
GO:0072345 F NAADP-sensitive calcium-release channel activity
GO:0086010 P membrane depolarization during action potential
FPKM:2.42 TPM:1.91
2132 A_BomoMG_comp17691_c1_seq1
228bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_two_pore_calcium_channel_protein_1-like_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005245 F voltage-gated calcium channel activity
GO:0005262 F calcium channel activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0010008 C endosome membrane
GO:0010508 P positive regulation of autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042802 F identical protein binding
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0055085 P transmembrane transport
GO:0070588 P calcium ion transmembrane transport
GO:0072345 F NAADP-sensitive calcium-release channel activity
GO:0086010 P membrane depolarization during action potential
FPKM:4.59 TPM:3.63
2133 A_BomoMG_comp17692_c0_seq1
581bp
 PREDICTED:_nuclear_RNA_export_factor_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0042272 C nuclear RNA export factor complex
GO:0044822 F RNA binding
GO:0050658 P RNA transport
GO:0051028 P mRNA transport
FPKM:2.48 TPM:1.96
2134 A_BomoMG_comp17693_c0_seq1
950bp
 PREDICTED:_phosphatidate_cytidylyltransferase,_photoreceptor-specific_[Amyelois_transitella]
GO:0004605 F phosphatidate cytidylyltransferase activity
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005790 C smooth endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006629 P lipid metabolic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0007430 P terminal branching, open tracheal system
GO:0007601 P visual perception
GO:0007602 P phototransduction
GO:0008654 P phospholipid biosynthetic process
GO:0010883 P regulation of lipid storage
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016049 P cell growth
GO:0016056 P rhodopsin mediated signaling pathway
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0016779 F nucleotidyltransferase activity
GO:0019915 P lipid storage
GO:0043052 P thermotaxis
GO:0050896 P response to stimulus
GO:0060439 P trachea morphogenesis
FPKM:2.03 TPM:1.61
2135 A_BomoMG_comp17694_c0_seq1
390bp
 endonuclease-reverse_transcriptase_[Danaus_plexippus]
FPKM:2.30 TPM:1.81
2136 A_BomoMG_comp17696_c0_seq1
369bp
 PREDICTED:_adenosine_deaminase_CECR1-like_[Plutella_xylostella]
GO:0004000 F adenosine deaminase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0019239 F deaminase activity
GO:0046872 F metal ion binding
FPKM:3.02 TPM:2.38
2137 A_BomoMG_comp17698_c0_seq1
401bp
 hypothetical_protein_[Candidatus_Protochlamydia_amoebophila]
FPKM:2.49 TPM:1.97
2138 A_BomoMG_comp176991_c0_seq1
403bp
FPKM:3.49 TPM:2.76
2139 A_BomoMG_comp17699_c0_seq1
253bp
 PREDICTED:_transcription_initiation_factor_TFIID_subunit_4_[Bombyx_mori]
FPKM:2.82 TPM:2.23
2140 A_BomoMG_comp17701_c0_seq1
716bp
 PREDICTED:_collagen_alpha-2(IV)_chain_[Bombyx_mori]
GO:0005581 C collagen trimer
GO:0019012 C virion component
FPKM:2.35 TPM:1.86
2141 A_BomoMG_comp17703_c0_seq1
310bp
 PREDICTED:_uncharacterized_protein_LOC101743057_[Bombyx_mori]
FPKM:2.74 TPM:2.17
2142 A_BomoMG_comp17704_c0_seq1
492bp
FPKM:2.05 TPM:1.62
2143 A_BomoMG_comp17706_c0_seq1
313bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105841478_[Bombyx_mori]
FPKM:1.35 TPM:1.06
2144 A_BomoMG_comp17708_c0_seq1
208bp
FPKM:4.22 TPM:3.33
2145 A_BomoMG_comp177094_c0_seq1
647bp
 partner_of_Y14_and_mago_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0035145 C exon-exon junction complex
FPKM:3.79 TPM:2.99
2146 A_BomoMG_comp17709_c0_seq1
371bp
 putative_heparan_sulfate_6-o-sulfotransferase,_partial_[Operophtera_brumata]
FPKM:3.32 TPM:2.63
2147 A_BomoMG_comp17710_c0_seq1
842bp
FPKM:2.51 TPM:1.98
2148 A_BomoMG_comp177128_c0_seq1
514bp
FPKM:2.03 TPM:1.60
2149 A_BomoMG_comp17712_c0_seq1
234bp
 PREDICTED:_P_protein-like_isoform_X3_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005765 C lysosomal membrane
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0007286 P spermatid development
GO:0008283 P cell population proliferation
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030318 P melanocyte differentiation
GO:0033162 C melanosome membrane
GO:0042438 P melanin biosynthetic process
GO:0043473 P pigmentation
GO:0048066 P developmental pigmentation
GO:0055085 P transmembrane transport
GO:0098656 P anion transmembrane transport
FPKM:4.28 TPM:3.38
2150 A_BomoMG_comp17713_c0_seq1
250bp
FPKM:4.71 TPM:3.72
2151 A_BomoMG_comp17714_c0_seq1
311bp
FPKM:3.41 TPM:2.69
2152 A_BomoMG_comp177162_c0_seq1
538bp
FPKM:3.52 TPM:2.78
2153 A_BomoMG_comp177168_c0_seq1
398bp
 hypothetical_protein_MELLADRAFT_113846_[Melampsora_larici-populina_98AG31]
FPKM:2.96 TPM:2.34
2154 A_BomoMG_comp17718_c0_seq1
381bp
FPKM:1.43 TPM:1.13
2155 A_BomoMG_comp17720_c0_seq1
687bp
FPKM:1.38 TPM:1.09
2156 A_BomoMG_comp17721_c0_seq1
377bp
 hypothetical_protein_FF38_11566_[Lucilia_cuprina]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0040012 P regulation of locomotion
GO:0042393 F histone binding
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0071557 P histone H3-K27 demethylation
GO:0071558 F histone H3-tri/di-methyl-lysine-27 demethylase activity
FPKM:3.40 TPM:2.68
2157 A_BomoMG_comp17724_c0_seq1
764bp
 paralytic_[Bombyx_mori]
GO:0001518 C voltage-gated sodium channel complex
GO:0001666 P response to hypoxia
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005248 F voltage-gated sodium channel activity
GO:0005272 F sodium channel activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0007268 P chemical synaptic transmission
GO:0007638 P mechanosensory behavior
GO:0009612 P response to mechanical stimulus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019228 P neuronal action potential
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0042493 P response to xenobiotic stimulus
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0046680 P response to DDT
GO:0046684 P response to pyrethroid
GO:0055085 P transmembrane transport
GO:0060078 P regulation of postsynaptic membrane potential
GO:0086010 P membrane depolarization during action potential
FPKM:1.56 TPM:1.24
2158 A_BomoMG_comp17724_c1_seq1
320bp
 para_sodium_channel_alpha_subunit_[Bombyx_mori]
GO:0001518 C voltage-gated sodium channel complex
GO:0001666 P response to hypoxia
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005248 F voltage-gated sodium channel activity
GO:0005272 F sodium channel activity
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0007268 P chemical synaptic transmission
GO:0007638 P mechanosensory behavior
GO:0009612 P response to mechanical stimulus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019228 P neuronal action potential
GO:0034220 P ion transmembrane transport
GO:0034765 P regulation of ion transmembrane transport
GO:0035725 P sodium ion transmembrane transport
GO:0042493 P response to xenobiotic stimulus
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0046680 P response to DDT
GO:0046684 P response to pyrethroid
GO:0055085 P transmembrane transport
GO:0060078 P regulation of postsynaptic membrane potential
GO:0086010 P membrane depolarization during action potential
FPKM:3.02 TPM:2.38
2159 A_BomoMG_comp17725_c0_seq1
723bp
FPKM:2.06 TPM:1.63
2160 A_BomoMG_comp17727_c0_seq1
286bp
 NADPH_oxidoreductase_[Bombyx_mori]
FPKM:1.61 TPM:1.27
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