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GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0001666	P	response to hypoxia
GO:0001822	P	kidney development
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005622	C	intracellular anatomical structure
GO:0005634	C	nucleus
GO:0005730	C	nucleolus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007275	P	multicellular organism development
GO:0007576	P	nucleolar fragmentation
GO:0046872	F	metal ion binding
GO:0051593	P	response to folic acid

FPKM:3.20 TPM:2.53

1778

A_BomoMG_comp17359_c1_seq1

298bp

Bomo_Chr24

PREDICTED:_gastrula_zinc_finger_protein_XlCGF46.1-like_[Bombyx_mori]

GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0000976	F	transcription cis-regulatory region binding
GO:0000978	F	RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078	F	DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003690	F	double-stranded DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005794	C	Golgi apparatus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006461	P	protein-containing complex assembly
GO:0007276	P	gamete generation
GO:0010629	P	negative regulation of gene expression
GO:0021762	P	substantia nigra development
GO:0043565	F	sequence-specific DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0045944	P	positive regulation of transcription by RNA polymerase II
GO:0046872	F	metal ion binding

FPKM:0.49 TPM:0.39

1779

A_BomoMG_comp17360_c0_seq1

1062bp

Bomo_Chr28

PREDICTED:_sorting_nexin-15_[Bombyx_mori]

GO:0004674	F	protein serine/threonine kinase activity
GO:0005730	C	nucleolus
GO:0005737	C	cytoplasm
GO:0006468	P	protein phosphorylation
GO:0006810	P	transport
GO:0007165	P	signal transduction
GO:0015031	P	protein transport
GO:0035091	F	phosphatidylinositol binding
GO:0043231	C	intracellular membrane-bounded organelle

FPKM:2.51 TPM:1.99

1780

A_BomoMG_comp173614_c0_seq1

2361bp

Bomo_Chr25

FPKM:2.86 TPM:2.26

1781

A_BomoMG_comp173616_c0_seq1

331bp

Bomo_Chr15

Integrator_complex_subunit_8_[Papilio_xuthus]

GO:0003674	F	molecular_function
GO:0005634	C	nucleus
GO:0016180	P	snRNA processing
GO:0032039	C	integrator complex

FPKM:5.26 TPM:4.16

1782

A_BomoMG_comp17362_c0_seq1

1559bp

Bomo_Chr24

PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_CBL-B-B_[Papilio_machaon]

GO:0001784	F	phosphotyrosine residue binding
GO:0004842	F	ubiquitin-protein transferase activity
GO:0004871	F	obsolete signal transducer activity
GO:0005509	F	calcium ion binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005886	C	plasma membrane
GO:0006468	P	protein phosphorylation
GO:0007166	P	cell surface receptor signaling pathway
GO:0008270	F	zinc ion binding
GO:0014068	P	positive regulation of phosphatidylinositol 3-kinase signaling
GO:0016020	C	membrane
GO:0016567	P	protein ubiquitination
GO:0016600	C	flotillin complex
GO:0016874	F	ligase activity
GO:0017124	F	SH3 domain binding
GO:0023051	P	regulation of signaling
GO:0042059	P	negative regulation of epidermal growth factor receptor signaling pathway
GO:0042787	P	ubiquitin-dependent protein catabolic process
GO:0043066	P	negative regulation of apoptotic process
GO:0045453	P	bone resorption
GO:0046872	F	metal ion binding
GO:0046875	F	ephrin receptor binding
GO:0048260	P	positive regulation of receptor-mediated endocytosis

FPKM:2.29 TPM:1.81

1783

A_BomoMG_comp173635_c0_seq1

344bp

Bomo_Chr21

FPKM:3.59 TPM:2.84

1784

A_BomoMG_comp17363_c0_seq1

1373bp

Bomo_Chr14

FPKM:2.30 TPM:1.82

1785

A_BomoMG_comp17364_c0_seq1

467bp

Bomo_Chr14

FPKM:2.79 TPM:2.20

1786

A_BomoMG_comp17366_c0_seq1

1139bp

Bomo_Chr13

Zinc_finger_protein_jing-like_[Papilio_machaon]

GO:0003676	F	nucleic acid binding
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0016568	P	chromatin organization
GO:0046872	F	metal ion binding

FPKM:2.24 TPM:1.77

1787

A_BomoMG_comp173677_c0_seq1

2338bp

Bomo_Chr1

FPKM:2.25 TPM:1.78

1788

A_BomoMG_comp17368_c0_seq1

367bp

Bomo_Chr23

flagellar_motor_switch_protein_FliG_[Coxiellaceae_bacterium_CC99]

FPKM:3.21 TPM:2.54

1789

A_BomoMG_comp17369_c0_seq1

293bp

Bomo_Chr22

FPKM:3.58 TPM:2.83

1790

A_BomoMG_comp17370_c0_seq1

342bp

Bomo_Chr6

PREDICTED:_epidermal_growth_factor_receptor_substrate_15-like_1_isoform_X3_[Lepisosteus_oculatus]

FPKM:3.82 TPM:3.02

1791

A_BomoMG_comp17370_c1_seq1

580bp

Bomo_Chr6

PREDICTED:_collagen_alpha_chain_CG42342-like_isoform_X7_[Bombyx_mori]

FPKM:2.49 TPM:1.97

1792

A_BomoMG_comp17371_c0_seq1

247bp

Bomo_Scaf097

NADPH_oxidoreductase_[Bombyx_mori]

FPKM:1.12 TPM:0.88

1793

A_BomoMG_comp17372_c0_seq1

1490bp

Bomo_Chr13

Uncharacterized_protein_OBRU01_06377_[Operophtera_brumata]

FPKM:2.15 TPM:1.70

1794

A_BomoMG_comp17374_c0_seq1

731bp

Bomo_Chr11

PREDICTED:_retinoid_isomerohydrolase_[Otolemur_garnettii]

FPKM:2.02 TPM:1.59

1795

A_BomoMG_comp17375_c0_seq1

466bp

Bomo_Chr15

PREDICTED:_protein_crumbs_[Bombyx_mori]

GO:0001738	P	morphogenesis of a polarized epithelium
GO:0001745	P	compound eye morphogenesis
GO:0002009	P	morphogenesis of an epithelium
GO:0005080	F	protein kinase C binding
GO:0005509	F	calcium ion binding
GO:0005515	F	protein binding
GO:0005886	C	plasma membrane
GO:0005913	C	adherens junction
GO:0005918	C	septate junction
GO:0007043	P	cell-cell junction assembly
GO:0007163	P	establishment or maintenance of cell polarity
GO:0007275	P	multicellular organism development
GO:0007399	P	nervous system development
GO:0007424	P	open tracheal system development
GO:0007431	P	salivary gland development
GO:0007435	P	salivary gland morphogenesis
GO:0007443	P	Malpighian tubule morphogenesis
GO:0008104	P	protein localization
GO:0008284	P	positive regulation of cell population proliferation
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016028	C	rhabdomere
GO:0016324	C	apical plasma membrane
GO:0016327	C	apicolateral plasma membrane
GO:0016332	P	establishment or maintenance of polarity of embryonic epithelium
GO:0016334	P	establishment or maintenance of polarity of follicular epithelium
GO:0030154	P	cell differentiation
GO:0030507	F	spectrin binding
GO:0032435	P	negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032880	P	regulation of protein localization
GO:0033157	P	regulation of intracellular protein transport
GO:0034332	P	adherens junction organization
GO:0035002	P	liquid clearance, open tracheal system
GO:0035003	C	subapical complex
GO:0035088	P	establishment or maintenance of apical/basal cell polarity
GO:0035090	P	maintenance of apical/basal cell polarity
GO:0035239	P	tube morphogenesis
GO:0035330	P	regulation of hippo signaling
GO:0042051	P	compound eye photoreceptor development
GO:0042052	P	rhabdomere development
GO:0042327	P	positive regulation of phosphorylation
GO:0045186	P	zonula adherens assembly
GO:0045197	P	establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198	P	establishment of epithelial cell apical/basal polarity
GO:0045218	P	zonula adherens maintenance
GO:0045494	P	photoreceptor cell maintenance
GO:0045570	P	regulation of imaginal disc growth
GO:0045746	P	negative regulation of Notch signaling pathway
GO:0046621	P	negative regulation of organ growth
GO:0046664	P	dorsal closure, amnioserosa morphology change
GO:0048477	P	oogenesis
GO:0050821	P	protein stabilization
GO:0051642	P	centrosome localization
GO:0061024	P	membrane organization
GO:0061336	P	cell morphogenesis involved in Malpighian tubule morphogenesis
GO:0061541	P	rhabdomere morphogenesis
GO:0098813	P	nuclear chromosome segregation

FPKM:2.33 TPM:1.84

1796

A_BomoMG_comp17376_c0_seq1

293bp

Bomo_Chr2

hypothetical_protein_[Neptunomonas_antarctica]

FPKM:2.04 TPM:1.61

1797

A_BomoMG_comp17377_c0_seq1

816bp

Bomo_Chr15

hypothetical_protein_KGM_01538_[Danaus_plexippus]

GO:0000027	P	ribosomal large subunit assembly
GO:0000460	P	maturation of 5.8S rRNA
GO:0000470	P	maturation of LSU-rRNA
GO:0003723	F	RNA binding
GO:0005634	C	nucleus
GO:0005730	C	nucleolus
GO:0006364	P	rRNA processing
GO:0019843	F	rRNA binding
GO:0030687	C	preribosome, large subunit precursor
GO:0042134	F	rRNA primary transcript binding
GO:0042254	P	ribosome biogenesis

FPKM:2.55 TPM:2.02

1798

A_BomoMG_comp17378_c0_seq1

263bp

Bomo_Chr16

Transcription_initiation_protein_SPT3-like_[Papilio_xuthus]

GO:0000124	C	SAGA complex
GO:0002230	P	positive regulation of defense response to virus by host
GO:0003677	F	DNA binding
GO:0003713	F	transcription coactivator activity
GO:0004402	F	histone acetyltransferase activity
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005669	C	transcription factor TFIID complex
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006357	P	regulation of transcription by RNA polymerase II
GO:0006366	P	transcription by RNA polymerase II
GO:0016578	P	histone deubiquitination
GO:0030914	C	SAGA complex
GO:0033276	C	transcription factor TFTC complex
GO:0043966	P	histone H3 acetylation
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0046982	F	protein heterodimerization activity
GO:0098779	P	positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792	P	xenophagy