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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1171 A_BomoMG_comp162165_c0_seq1
524bp
 PREDICTED:_anaphase-promoting_complex_subunit_1-like_[Bombyx_mori]
FPKM:4.24 TPM:3.35
1172 A_BomoMG_comp162192_c0_seq1
386bp
FPKM:2.49 TPM:1.97
1173 A_BomoMG_comp162449_c0_seq1
377bp
FPKM:5.18 TPM:4.09
1174 A_BomoMG_comp162492_c0_seq1
1177bp
 PREDICTED:_PAX-interacting_protein_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
FPKM:3.10 TPM:2.45
1175 A_BomoMG_comp162716_c0_seq1
454bp
FPKM:4.24 TPM:3.35
1176 A_BomoMG_comp162776_c0_seq1
344bp
FPKM:4.35 TPM:3.44
1177 A_BomoMG_comp162785_c0_seq1
237bp
FPKM:0.41 TPM:0.33
1178 A_BomoMG_comp162843_c0_seq1
579bp
 olfactory_receptor_[Bombyx_mori]
FPKM:1.55 TPM:1.22
1179 A_BomoMG_comp162843_c0_seq2
579bp
 olfactory_receptor_[Bombyx_mori]
FPKM:1.55 TPM:1.22
1180 A_BomoMG_comp162929_c0_seq1
273bp
FPKM:3.85 TPM:3.04
1181 A_BomoMG_comp163017_c0_seq1
2590bp
 PREDICTED:_ribonuclease_3_[Bombyx_mori]
GO:0001530 F lipopolysaccharide binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0004525 F ribonuclease III activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006396 P RNA processing
GO:0010468 P regulation of gene expression
GO:0010586 P miRNA metabolic process
GO:0010628 P positive regulation of gene expression
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0030422 P production of siRNA involved in RNA interference
GO:0031053 P primary miRNA processing
GO:0031054 P pre-miRNA processing
GO:0042254 P ribosome biogenesis
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0050829 P defense response to Gram-negative bacterium
GO:0050830 P defense response to Gram-positive bacterium
GO:0070877 C microprocessor complex
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:2000628 P regulation of miRNA metabolic process
FPKM:2.84 TPM:2.24
1182 A_BomoMG_comp163018_c0_seq1
244bp
FPKM:5.77 TPM:4.56
1183 A_BomoMG_comp163131_c0_seq1
366bp
 MULTISPECIES:_conjugal_transfer_protein_TraH_[Citrobacter]
FPKM:3.57 TPM:2.82
1184 A_BomoMG_comp163178_c0_seq1
410bp
FPKM:3.98 TPM:3.14
1185 A_BomoMG_comp163281_c0_seq1
1117bp
 Uncharacterized_protein_OBRU01_02243_[Operophtera_brumata]
FPKM:3.86 TPM:3.05
1186 A_BomoMG_comp163296_c0_seq1
407bp
FPKM:2.58 TPM:2.03
1187 A_BomoMG_comp163345_c0_seq1
372bp
FPKM:5.13 TPM:4.05
1188 A_BomoMG_comp163482_c0_seq1
920bp
FPKM:3.70 TPM:2.92
1189 A_BomoMG_comp163515_c0_seq1
781bp
 PREDICTED:_exportin-6_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
FPKM:3.10 TPM:2.45
1190 A_BomoMG_comp163590_c0_seq1
508bp
FPKM:5.97 TPM:4.72
1191 A_BomoMG_comp163606_c0_seq1
441bp
 PREDICTED:_uncharacterized_protein_LOC106108555_isoform_X5_[Papilio_polytes]
FPKM:3.92 TPM:3.10
1192 A_BomoMG_comp163620_c0_seq1
296bp
FPKM:1.50 TPM:1.19
1193 A_BomoMG_comp163686_c0_seq1
1250bp
 hypothetical_protein_CTM_22841_[Clostridium_tetanomorphum_DSM_665]
FPKM:3.33 TPM:2.63
1194 A_BomoMG_comp163855_c0_seq1
206bp
FPKM:3.83 TPM:3.03
1195 A_BomoMG_comp164013_c0_seq1
271bp
FPKM:6.32 TPM:4.99
1196 A_BomoMG_comp164023_c0_seq1
381bp
 putative_Rho-associated_protein_kinase_[Danaus_plexippus]
FPKM:4.14 TPM:3.27
1197 A_BomoMG_comp164148_c0_seq1
1084bp
 PREDICTED:_DNA-directed_RNA_polymerases_I_and_III_subunit_RPAC1_isoform_X1_[Papilio_machaon]
GO:0000183 P rDNA heterochromatin assembly
GO:0001054 F RNA polymerase I activity
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005666 C RNA polymerase III complex
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006383 P transcription by RNA polymerase III
GO:0008150 P biological_process
GO:0034587 P piRNA metabolic process
GO:0046983 F protein dimerization activity
FPKM:3.45 TPM:2.72
1198 A_BomoMG_comp164296_c0_seq1
209bp
 cell_division_protein_FtsK_[Roseivirga_spongicola]
FPKM:2.37 TPM:1.88
1199 A_BomoMG_comp164370_c0_seq1
353bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA1109_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019915 P lipid storage
GO:0045444 P fat cell differentiation
GO:0051647 P nucleus localization
GO:0060612 P adipose tissue development
FPKM:5.42 TPM:4.28
1200 A_BomoMG_comp164468_c0_seq1
409bp
 serine_protease_inhibitor_33_precursor_[Bombyx_mori]
FPKM:0.99 TPM:0.79
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