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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4651 A_BomoFB_comp10566_c2_seq22
1275bp
 PREDICTED:_methyltransferase-like_protein_5_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
FPKM:5.87 TPM:6.43
4652 A_BomoFB_comp10566_c2_seq23
360bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4653 A_BomoFB_comp10566_c2_seq24
1348bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:3.13 TPM:3.43
4654 A_BomoFB_comp10566_c2_seq25
635bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:6.27 TPM:6.87
4655 A_BomoFB_comp10566_c2_seq3
1123bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:0.50 TPM:0.55
4656 A_BomoFB_comp10566_c2_seq4
418bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:10.62 TPM:11.64
4657 A_BomoFB_comp10566_c2_seq5
516bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:22.33 TPM:24.47
4658 A_BomoFB_comp10566_c2_seq6
275bp
FPKM:33.38 TPM:36.58
4659 A_BomoFB_comp10566_c2_seq7
1192bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4660 A_BomoFB_comp10566_c2_seq8
352bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4661 A_BomoFB_comp10566_c2_seq9
1174bp
 reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4662 A_BomoFB_comp10566_c3_seq1
1613bp
 p38_map_kinase_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0001934 P positive regulation of protein phosphorylation
GO:0003007 P heart morphogenesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004707 F MAP kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0006952 P defense response
GO:0006955 P immune response
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007623 P circadian rhythm
GO:0008340 P determination of adult lifespan
GO:0009408 P response to heat
GO:0009617 P response to bacterium
GO:0009651 P response to salt stress
GO:0010906 P regulation of glucose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016909 F MAP kinase activity
GO:0030510 P regulation of BMP signaling pathway
GO:0034614 P cellular response to reactive oxygen species
GO:0038001 P paracrine signaling
GO:0040018 P positive regulation of multicellular organism growth
GO:0042542 P response to hydrogen peroxide
GO:0042594 P response to starvation
GO:0042742 P defense response to bacterium
GO:0045088 P regulation of innate immune response
GO:0045793 P positive regulation of cell size
GO:0048082 P regulation of adult chitin-containing cuticle pigmentation
GO:0050832 P defense response to fungus
GO:0071243 P cellular response to arsenic-containing substance
GO:0071276 P cellular response to cadmium ion
GO:0072593 P reactive oxygen species metabolic process
GO:1900407 P regulation of cellular response to oxidative stress
GO:2000331 P regulation of terminal button organization
FPKM:9.11 TPM:9.98
4663 A_BomoFB_comp10566_c3_seq2
928bp
 p38_map_kinase_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0001934 P positive regulation of protein phosphorylation
GO:0003007 P heart morphogenesis
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004707 F MAP kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0006952 P defense response
GO:0006955 P immune response
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007623 P circadian rhythm
GO:0008340 P determination of adult lifespan
GO:0009408 P response to heat
GO:0009617 P response to bacterium
GO:0009651 P response to salt stress
GO:0010906 P regulation of glucose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016909 F MAP kinase activity
GO:0030510 P regulation of BMP signaling pathway
GO:0034614 P cellular response to reactive oxygen species
GO:0038001 P paracrine signaling
GO:0040018 P positive regulation of multicellular organism growth
GO:0042542 P response to hydrogen peroxide
GO:0042594 P response to starvation
GO:0042742 P defense response to bacterium
GO:0045088 P regulation of innate immune response
GO:0045793 P positive regulation of cell size
GO:0048082 P regulation of adult chitin-containing cuticle pigmentation
GO:0050832 P defense response to fungus
GO:0071243 P cellular response to arsenic-containing substance
GO:0071276 P cellular response to cadmium ion
GO:0072593 P reactive oxygen species metabolic process
GO:1900407 P regulation of cellular response to oxidative stress
GO:2000331 P regulation of terminal button organization
FPKM:0.37 TPM:0.40
4664 A_BomoFB_comp1056705_c0_seq1
205bp
FPKM:1.62 TPM:1.78
4665 A_BomoFB_comp1056719_c0_seq1
256bp
FPKM:0.71 TPM:0.78
4666 A_BomoFB_comp105671_c0_seq1
1484bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX10_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
FPKM:2.80 TPM:3.06
4667 A_BomoFB_comp1056723_c0_seq1
268bp
 PREDICTED:_uncharacterized_protein_LOC105841881_[Bombyx_mori]
FPKM:0.62 TPM:0.68
4668 A_BomoFB_comp105678_c0_seq1
455bp
 PREDICTED:_protein_unc-13_homolog_C-like_[Amyelois_transitella]
FPKM:4.59 TPM:5.03
4669 A_BomoFB_comp10567_c0_seq1
1907bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:4.10 TPM:4.49
4670 A_BomoFB_comp10567_c0_seq2
1921bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:3.53 TPM:3.87
4671 A_BomoFB_comp10567_c0_seq3
3682bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.09 TPM:2.30
4672 A_BomoFB_comp10567_c0_seq4
3763bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.60 TPM:2.85
4673 A_BomoFB_comp10567_c0_seq5
271bp
 UvrD/REP_helicase_[Ktedonobacter_racemifer]
FPKM:1.20 TPM:1.31
4674 A_BomoFB_comp10567_c0_seq6
2354bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:1.81 TPM:1.98
4675 A_BomoFB_comp10567_c0_seq7
212bp
 hypothetical_protein_PFL1_02924_[Anthracocystis_flocculosa_PF-1]
FPKM:9.81 TPM:10.75
4676 A_BomoFB_comp10567_c0_seq8
616bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.61 TPM:2.86
4677 A_BomoFB_comp105684_c0_seq1
993bp
 Collagen_triple_helix_repeat_protein,_partial_[Operophtera_brumata]
FPKM:3.69 TPM:4.04
4678 A_BomoFB_comp1056855_c0_seq1
226bp
 PREDICTED:_sodium-coupled_monocarboxylate_transporter_1-like_[Amyelois_transitella]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006814 P sodium ion transport
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:2.17 TPM:2.38
4679 A_BomoFB_comp1056872_c0_seq1
224bp
FPKM:2.24 TPM:2.46
4680 A_BomoFB_comp10568_c0_seq1
921bp
 transposase_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0032502 P developmental process
FPKM:11.49 TPM:12.59
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