SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/35635
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4411 A_BomoFB_comp10561_c4_seq40
831bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:2.00 TPM:2.19
4412 A_BomoFB_comp10561_c4_seq41
668bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:18.33 TPM:20.08
4413 A_BomoFB_comp10561_c4_seq42
1083bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4414 A_BomoFB_comp10561_c4_seq43
4445bp
 olfactory_receptor_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4415 A_BomoFB_comp10561_c4_seq44
1009bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4416 A_BomoFB_comp10561_c4_seq45
1132bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4417 A_BomoFB_comp10561_c4_seq46
1471bp
 PREDICTED:_glutathione_synthetase-like_isoform_X1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005524 F ATP binding
GO:0006750 P glutathione biosynthetic process
GO:0016874 F ligase activity
GO:0042803 F protein homodimerization activity
GO:0043295 F glutathione binding
GO:0046872 F metal ion binding
FPKM:0.19 TPM:0.21
4418 A_BomoFB_comp10561_c4_seq47
618bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4419 A_BomoFB_comp10561_c4_seq48
565bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:2.78 TPM:3.05
4420 A_BomoFB_comp10561_c4_seq49
1419bp
 PREDICTED:_glutathione_synthetase-like_isoform_X1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005524 F ATP binding
GO:0006750 P glutathione biosynthetic process
GO:0016874 F ligase activity
GO:0042803 F protein homodimerization activity
GO:0043295 F glutathione binding
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
4421 A_BomoFB_comp10561_c4_seq5
691bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4422 A_BomoFB_comp10561_c4_seq50
1512bp
 PREDICTED:_glutathione_synthetase-like_isoform_X1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005524 F ATP binding
GO:0006750 P glutathione biosynthetic process
GO:0016874 F ligase activity
GO:0042803 F protein homodimerization activity
GO:0043295 F glutathione binding
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
4423 A_BomoFB_comp10561_c4_seq51
2000bp
 PREDICTED:_sorting_nexin-20_[Papilio_xuthus]
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0008150 P biological_process
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
FPKM:0.00 TPM:0.00
4424 A_BomoFB_comp10561_c4_seq52
321bp
 PREDICTED:_uncharacterized_protein_LOC106127360_[Papilio_xuthus]
FPKM:2.67 TPM:2.92
4425 A_BomoFB_comp10561_c4_seq53
1723bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4426 A_BomoFB_comp10561_c4_seq54
2625bp
 PREDICTED:_glutathione_synthetase-like_isoform_X1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005524 F ATP binding
GO:0006750 P glutathione biosynthetic process
GO:0016874 F ligase activity
GO:0042803 F protein homodimerization activity
GO:0043295 F glutathione binding
GO:0046872 F metal ion binding
FPKM:0.37 TPM:0.40
4427 A_BomoFB_comp10561_c4_seq55
1447bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4428 A_BomoFB_comp10561_c4_seq56
1215bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4429 A_BomoFB_comp10561_c4_seq57
1007bp
 putative_protein_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4430 A_BomoFB_comp10561_c4_seq58
500bp
 PREDICTED:_RNA_polymerase_II_elongation_factor_Ell_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4431 A_BomoFB_comp10561_c4_seq59
1536bp
 PREDICTED:_glutathione_synthetase-like_isoform_X1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005524 F ATP binding
GO:0006750 P glutathione biosynthetic process
GO:0016874 F ligase activity
GO:0042803 F protein homodimerization activity
GO:0043295 F glutathione binding
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
4432 A_BomoFB_comp10561_c4_seq6
763bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4433 A_BomoFB_comp10561_c4_seq60
323bp
FPKM:2.70 TPM:2.96
4434 A_BomoFB_comp10561_c4_seq61
934bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:2.33 TPM:2.55
4435 A_BomoFB_comp10561_c4_seq62
553bp
 PREDICTED:_RNA_polymerase_II_elongation_factor_Ell_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4436 A_BomoFB_comp10561_c4_seq63
756bp
 PREDICTED:_uncharacterized_protein_LOC105841725_[Bombyx_mori]
FPKM:0.00 TPM:0.00
4437 A_BomoFB_comp10561_c4_seq64
4106bp
 PREDICTED:_HEAT_repeat-containing_protein_6_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:0.01 TPM:0.01
4438 A_BomoFB_comp10561_c4_seq65
4900bp
 PREDICTED:_HEAT_repeat-containing_protein_6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005524 F ATP binding
GO:0006750 P glutathione biosynthetic process
GO:0007568 P aging
GO:0009410 P response to xenobiotic stimulus
GO:0016594 F glycine binding
GO:0016874 F ligase activity
GO:0031667 P response to nutrient levels
GO:0034612 P response to tumor necrosis factor
GO:0042277 F peptide binding
GO:0042803 F protein homodimerization activity
GO:0043200 P response to amino acid
GO:0043295 F glutathione binding
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
4439 A_BomoFB_comp10561_c4_seq66
1471bp
 PREDICTED:_glutathione_synthetase-like_isoform_X2_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006520 P cellular amino acid metabolic process
GO:0006750 P glutathione biosynthetic process
GO:0006979 P response to oxidative stress
GO:0007399 P nervous system development
GO:0007568 P aging
GO:0009410 P response to xenobiotic stimulus
GO:0016594 F glycine binding
GO:0016874 F ligase activity
GO:0031667 P response to nutrient levels
GO:0034612 P response to tumor necrosis factor
GO:0042277 F peptide binding
GO:0042803 F protein homodimerization activity
GO:0043200 P response to amino acid
GO:0043295 F glutathione binding
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
FPKM:0.00 TPM:0.00
4440 A_BomoFB_comp10561_c4_seq67
4310bp
 PREDICTED:_HEAT_repeat-containing_protein_6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004363 F glutathione synthase activity
GO:0005524 F ATP binding
GO:0006750 P glutathione biosynthetic process
GO:0016874 F ligase activity
GO:0042803 F protein homodimerization activity
GO:0043295 F glutathione binding
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
previous next from show/35635

- SilkBase 1999-2023 -