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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3481 A_BomoFB_comp10520_c2_seq45
359bp
 chorion_class_A_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3482 A_BomoFB_comp10520_c2_seq5
691bp
FPKM:2.99 TPM:3.28
3483 A_BomoFB_comp10520_c2_seq6
485bp
FPKM:0.00 TPM:0.00
3484 A_BomoFB_comp10520_c2_seq7
1317bp
 PREDICTED:_23_kDa_integral_membrane_protein-like_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3485 A_BomoFB_comp10520_c2_seq8
517bp
FPKM:16.74 TPM:18.34
3486 A_BomoFB_comp10520_c2_seq9
488bp
FPKM:0.00 TPM:0.00
3487 A_BomoFB_comp10520_c3_seq1
1085bp
FPKM:2.11 TPM:2.31
3488 A_BomoFB_comp10520_c5_seq1
312bp
 hypothetical_protein_[Actinobacteria_bacterium_OK006]
FPKM:11.27 TPM:12.35
3489 A_BomoFB_comp105218_c0_seq1
704bp
 PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX20_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000387 P spliceosomal snRNP assembly
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032797 C SMN complex
GO:0034719 C SMN-Sm protein complex
FPKM:3.33 TPM:3.65
3490 A_BomoFB_comp10521_c0_seq1
1182bp
 Uncharacterized_protein_OBRU01_24464_[Operophtera_brumata]
FPKM:0.42 TPM:0.46
3491 A_BomoFB_comp10521_c0_seq2
5591bp
 hypothetical_protein_RF55_12429_[Lasius_niger]
FPKM:6.82 TPM:7.47
3492 A_BomoFB_comp10522_c0_seq1
403bp
FPKM:1.16 TPM:1.27
3493 A_BomoFB_comp10522_c1_seq1
2605bp
FPKM:0.00 TPM:0.00
3494 A_BomoFB_comp10522_c1_seq10
2204bp
 putative_zinc_finger_CCCH-type_containing_10_[Danaus_plexippus]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
3495 A_BomoFB_comp10522_c1_seq11
4276bp
 putative_zinc_finger_CCCH-type_containing_10_[Danaus_plexippus]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
FPKM:3.88 TPM:4.25
3496 A_BomoFB_comp10522_c1_seq12
2192bp
FPKM:0.00 TPM:0.00
3497 A_BomoFB_comp10522_c1_seq13
1515bp
FPKM:0.66 TPM:0.72
3498 A_BomoFB_comp10522_c1_seq14
775bp
FPKM:1.27 TPM:1.39
3499 A_BomoFB_comp10522_c1_seq15
2661bp
FPKM:4.49 TPM:4.92
3500 A_BomoFB_comp10522_c1_seq2
1131bp
FPKM:6.39 TPM:7.00
3501 A_BomoFB_comp10522_c1_seq3
1048bp
FPKM:0.28 TPM:0.31
3502 A_BomoFB_comp10522_c1_seq4
718bp
FPKM:2.23 TPM:2.44
3503 A_BomoFB_comp10522_c1_seq5
2249bp
FPKM:0.00 TPM:0.00
3504 A_BomoFB_comp10522_c1_seq6
1678bp
 PREDICTED:_uncharacterized_protein_LOC105842934_isoform_X5_[Bombyx_mori]
FPKM:2.21 TPM:2.42
3505 A_BomoFB_comp10522_c1_seq7
1187bp
 Zinc_finger_CCCH_domain-containing_protein_10_[Papilio_machaon]
FPKM:3.14 TPM:3.44
3506 A_BomoFB_comp10522_c1_seq8
2254bp
 putative_zinc_finger_CCCH-type_containing_10_[Operophtera_brumata]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
FPKM:2.98 TPM:3.26
3507 A_BomoFB_comp10522_c1_seq9
2638bp
 putative_zinc_finger_CCCH-type_containing_10_[Danaus_plexippus]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
FPKM:2.81 TPM:3.08
3508 A_BomoFB_comp10523_c0_seq1
1059bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.23 TPM:1.35
3509 A_BomoFB_comp10523_c0_seq10
1243bp
 cuticular_protein_RR-1_motif_56_precursor_[Bombyx_mori]
GO:0008061 F chitin binding
GO:0042302 F structural constituent of cuticle
FPKM:3.79 TPM:4.15
3510 A_BomoFB_comp10523_c0_seq11
365bp
FPKM:0.72 TPM:0.78
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