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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2821 A_BomoFB_comp10478_c0_seq1
3196bp
 PREDICTED:_uncharacterized_protein_DDB_G0290301-like_[Bombyx_mori]
FPKM:172.68 TPM:189.21
2822 A_BomoFB_comp10478_c0_seq10
251bp
FPKM:2.26 TPM:2.48
2823 A_BomoFB_comp10478_c0_seq11
3334bp
 PREDICTED:_uncharacterized_protein_DDB_G0290301-like_[Bombyx_mori]
FPKM:8.44 TPM:9.25
2824 A_BomoFB_comp10478_c0_seq12
1092bp
FPKM:3.13 TPM:3.43
2825 A_BomoFB_comp10478_c0_seq13
3154bp
 PREDICTED:_uncharacterized_protein_DDB_G0290301-like_[Bombyx_mori]
FPKM:130.62 TPM:143.12
2826 A_BomoFB_comp10478_c0_seq14
1821bp
 PREDICTED:_guanylate_cyclase_32E-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004016 F adenylate cyclase activity
GO:0004383 F guanylate cyclase activity
GO:0004672 F protein kinase activity
GO:0004872 F signaling receptor activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006182 P cGMP biosynthetic process
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0008074 C guanylate cyclase complex, soluble
GO:0009190 P cyclic nucleotide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016849 F phosphorus-oxygen lyase activity
GO:0019934 P cGMP-mediated signaling
GO:0035556 P intracellular signal transduction
FPKM:15.74 TPM:17.25
2827 A_BomoFB_comp10478_c0_seq15
3460bp
 PREDICTED:_guanylate_cyclase_32E-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004016 F adenylate cyclase activity
GO:0004383 F guanylate cyclase activity
GO:0004672 F protein kinase activity
GO:0004872 F signaling receptor activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006182 P cGMP biosynthetic process
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0008074 C guanylate cyclase complex, soluble
GO:0009190 P cyclic nucleotide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016849 F phosphorus-oxygen lyase activity
GO:0019934 P cGMP-mediated signaling
GO:0035556 P intracellular signal transduction
FPKM:66.61 TPM:72.98
2828 A_BomoFB_comp10478_c0_seq2
1058bp
FPKM:0.04 TPM:0.04
2829 A_BomoFB_comp10478_c0_seq3
2110bp
 PREDICTED:_guanylate_cyclase_32E-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004016 F adenylate cyclase activity
GO:0004383 F guanylate cyclase activity
GO:0004672 F protein kinase activity
GO:0004872 F signaling receptor activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006182 P cGMP biosynthetic process
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0008074 C guanylate cyclase complex, soluble
GO:0009190 P cyclic nucleotide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016829 F lyase activity
GO:0016849 F phosphorus-oxygen lyase activity
GO:0019934 P cGMP-mediated signaling
GO:0035556 P intracellular signal transduction
FPKM:32.75 TPM:35.88
2830 A_BomoFB_comp10478_c0_seq4
4095bp
 PREDICTED:_uncharacterized_protein_DDB_G0290301-like_[Bombyx_mori]
FPKM:42.40 TPM:46.45
2831 A_BomoFB_comp10478_c0_seq5
3679bp
 PREDICTED:_uncharacterized_protein_DDB_G0290301-like_[Bombyx_mori]
FPKM:49.83 TPM:54.60
2832 A_BomoFB_comp10478_c0_seq6
1320bp
 uncharacterized_protein_LOC106117886_precursor_[Papilio_xuthus]
GO:0000302 P response to reactive oxygen species
GO:0001525 P angiogenesis
GO:0005215 F transporter activity
GO:0005319 F lipid transporter activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0006006 P glucose metabolic process
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007420 P brain development
GO:0007568 P aging
GO:0008289 F lipid binding
GO:0010642 P negative regulation of platelet-derived growth factor receptor signaling pathway
GO:0014012 P peripheral nervous system axon regeneration
GO:0015485 F cholesterol binding
GO:0022626 C cytosolic ribosome
GO:0030425 C dendrite
GO:0036094 F small molecule binding
GO:0042246 P tissue regeneration
GO:0042308 P negative regulation of protein import into nucleus
GO:0042493 P response to xenobiotic stimulus
GO:0043025 C neuronal cell body
GO:0048471 C perinuclear region of cytoplasm
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0048678 P response to axon injury
GO:0051895 P negative regulation of focal adhesion assembly
GO:0060588 P negative regulation of lipoprotein lipid oxidation
GO:0070062 C extracellular exosome
GO:0071638 P negative regulation of monocyte chemotactic protein-1 production
GO:1900016 P negative regulation of cytokine production involved in inflammatory response
GO:2000098 P negative regulation of smooth muscle cell-matrix adhesion
GO:2000405 P negative regulation of T cell migration
FPKM:124.63 TPM:136.56
2833 A_BomoFB_comp10478_c0_seq7
4137bp
 PREDICTED:_uncharacterized_protein_DDB_G0290301-like_[Bombyx_mori]
FPKM:74.93 TPM:82.10
2834 A_BomoFB_comp10478_c0_seq8
411bp
 PREDICTED:_uncharacterized_protein_LOC106492293_[Apteryx_australis_mantelli]
FPKM:2.55 TPM:2.79
2835 A_BomoFB_comp10478_c0_seq9
445bp
 PREDICTED:_uncharacterized_protein_LOC106492293_[Apteryx_australis_mantelli]
FPKM:11.25 TPM:12.33
2836 A_BomoFB_comp10479_c0_seq1
939bp
 PREDICTED:_uncharacterized_protein_LOC101737582,_partial_[Bombyx_mori]
FPKM:2.52 TPM:2.76
2837 A_BomoFB_comp10479_c0_seq2
984bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.40 TPM:0.44
2838 A_BomoFB_comp10479_c0_seq3
1376bp
 PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105841899,_partial_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2839 A_BomoFB_comp10479_c0_seq4
6170bp
 PREDICTED:_uncharacterized_protein_LOC105841762_[Bombyx_mori]
FPKM:5.70 TPM:6.25
2840 A_BomoFB_comp10479_c0_seq5
395bp
 PREDICTED:_uncharacterized_protein_LOC101737183_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:3.33 TPM:3.64
2841 A_BomoFB_comp10479_c0_seq6
364bp
 PREDICTED:_fatty_acid_synthase-like_[Bombyx_mori]
FPKM:5.09 TPM:5.58
2842 A_BomoFB_comp10479_c0_seq7
1106bp
 reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.43 TPM:0.47
2843 A_BomoFB_comp10479_c0_seq8
296bp
 NADP-dependent_aryl-alcohol_dehydrogenase_[Erwinia_billingiae]
FPKM:3.34 TPM:3.66
2844 A_BomoFB_comp10479_c0_seq9
254bp
FPKM:9.82 TPM:10.76
2845 A_BomoFB_comp104802_c0_seq1
237bp
FPKM:0.00 TPM:0.00
2846 A_BomoFB_comp104804_c0_seq1
639bp
 PREDICTED:_RB-associated_KRAB_zinc_finger_protein_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.74 TPM:3.00
2847 A_BomoFB_comp10480_c0_seq1
2679bp
 PREDICTED:_trehalase-2_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004555 F alpha,alpha-trehalase activity
GO:0005991 P trehalose metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
FPKM:2.52 TPM:2.76
2848 A_BomoFB_comp10480_c0_seq2
426bp
 ubiquinone_biosynthesis_regulatory_protein_kinase_UbiB_[Coxiellaceae_bacterium_CC99]
FPKM:1.12 TPM:1.22
2849 A_BomoFB_comp10480_c1_seq1
2151bp
 PREDICTED:_TFIIH_basal_transcription_factor_complex_helicase_XPD_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0006979 P response to oxidative stress
GO:0007059 P chromosome segregation
GO:0008022 F protein C-terminus binding
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0019907 C cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0032508 P DNA duplex unwinding
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0035315 P hair cell differentiation
GO:0043139 F 5'-3' DNA helicase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071817 C MMXD complex
GO:1901990 P regulation of mitotic cell cycle phase transition
FPKM:2.70 TPM:2.96
2850 A_BomoFB_comp10480_c2_seq1
3290bp
 PREDICTED:_la-related_protein_1_[Bombyx_mori]
FPKM:6.32 TPM:6.93
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