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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2251 A_BomoFB_comp10437_c0_seq21
478bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2252 A_BomoFB_comp10437_c0_seq3
1263bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.24 TPM:0.27
2253 A_BomoFB_comp10437_c0_seq4
722bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.47 TPM:1.61
2254 A_BomoFB_comp10437_c0_seq5
642bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:4.43 TPM:4.85
2255 A_BomoFB_comp10437_c0_seq6
406bp
FPKM:0.00 TPM:0.00
2256 A_BomoFB_comp10437_c0_seq7
905bp
FPKM:3.14 TPM:3.44
2257 A_BomoFB_comp10437_c0_seq8
379bp
 PREDICTED:_uncharacterized_protein_LOC105841463_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2258 A_BomoFB_comp10437_c0_seq9
693bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:3.48 TPM:3.81
2259 A_BomoFB_comp10438_c0_seq1
514bp
 PREDICTED:_THAP_domain-containing_protein_5_isoform_X1_[Bombyx_mori]
FPKM:2.79 TPM:3.06
2260 A_BomoFB_comp10438_c0_seq2
799bp
 PREDICTED:_THAP_domain-containing_protein_5_isoform_X1_[Bombyx_mori]
FPKM:3.00 TPM:3.28
2261 A_BomoFB_comp10438_c0_seq3
459bp
FPKM:0.00 TPM:0.00
2262 A_BomoFB_comp104398_c0_seq1
1103bp
FPKM:1.89 TPM:2.07
2263 A_BomoFB_comp10439_c0_seq1
323bp
FPKM:0.77 TPM:0.84
2264 A_BomoFB_comp10439_c1_seq1
654bp
 hypothetical_protein_KGM_11307_[Danaus_plexippus]
FPKM:2.19 TPM:2.40
2265 A_BomoFB_comp10439_c1_seq2
548bp
FPKM:7.59 TPM:8.32
2266 A_BomoFB_comp10439_c1_seq3
757bp
 hypothetical_protein_KGM_11307_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
2267 A_BomoFB_comp10439_c1_seq4
334bp
FPKM:0.00 TPM:0.00
2268 A_BomoFB_comp10439_c1_seq5
883bp
 hypothetical_protein_KGM_11307_[Danaus_plexippus]
FPKM:10.49 TPM:11.50
2269 A_BomoFB_comp10439_c1_seq6
395bp
 histidine_kinase_[Prevotella_paludivivens]
FPKM:38.01 TPM:41.65
2270 A_BomoFB_comp10439_c1_seq7
696bp
 hypothetical_protein_KGM_11307_[Danaus_plexippus]
FPKM:0.00 TPM:0.00
2271 A_BomoFB_comp10439_c1_seq8
910bp
 hypothetical_protein_KGM_11307_[Danaus_plexippus]
FPKM:6.09 TPM:6.67
2272 A_BomoFB_comp10439_c1_seq9
521bp
FPKM:0.00 TPM:0.00
2273 A_BomoFB_comp1043_c0_seq1
584bp
 PREDICTED:_gastrula_zinc_finger_protein_XlCGF46.1-like_[Bombyx_mori]
FPKM:0.95 TPM:1.04
2274 A_BomoFB_comp104402_c0_seq1
765bp
FPKM:3.54 TPM:3.88
2275 A_BomoFB_comp10440_c0_seq1
2756bp
 PREDICTED:_nucleolar_and_coiled-body_phosphoprotein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006970 P response to osmotic stress
GO:0008134 F transcription factor binding
GO:0008139 F nuclear localization sequence binding
GO:0008284 P positive regulation of cell population proliferation
GO:0019904 F protein domain specific binding
GO:0033979 P box H/ACA RNA metabolic process
GO:0034512 F box C/D RNA binding
GO:0034513 F box H/ACA snoRNA binding
GO:0042306 P regulation of protein import into nucleus
GO:0045893 P positive regulation of transcription, DNA-templated
FPKM:3.51 TPM:3.85
2276 A_BomoFB_comp10440_c0_seq2
3086bp
 PREDICTED:_nucleolar_and_coiled-body_phosphoprotein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0007000 P nucleolus organization
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0015030 C Cajal body
GO:0044822 F RNA binding
FPKM:9.29 TPM:10.18
2277 A_BomoFB_comp104412_c0_seq1
3249bp
 PREDICTED:_uncharacterized_protein_LOC101744779_[Bombyx_mori]
FPKM:2.90 TPM:3.18
2278 A_BomoFB_comp104413_c0_seq1
375bp
 PREDICTED:_nodal_modulator_1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
GO:0031648 P protein destabilization
FPKM:5.65 TPM:6.19
2279 A_BomoFB_comp104418_c0_seq1
743bp
 PREDICTED:_phosphatidylinositol_4-kinase_beta_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005783 C endoplasmic reticulum
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030867 C rough endoplasmic reticulum membrane
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
FPKM:4.56 TPM:4.99
2280 A_BomoFB_comp10441_c0_seq1
1946bp
FPKM:12.47 TPM:13.66
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