SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/35635
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2071 A_BomoFB_comp10415_c1_seq1
278bp
FPKM:3.91 TPM:4.28
2072 A_BomoFB_comp10415_c2_seq1
202bp
FPKM:5.21 TPM:5.71
2073 A_BomoFB_comp10415_c3_seq1
337bp
 hypothetical_protein_KGM_21772_[Danaus_plexippus]
FPKM:2.81 TPM:3.08
2074 A_BomoFB_comp10415_c3_seq10
523bp
 hypothetical_protein_KGM_21772_[Danaus_plexippus]
FPKM:5.91 TPM:6.47
2075 A_BomoFB_comp10415_c3_seq11
940bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0008150 P biological_process
FPKM:0.00 TPM:0.00
2076 A_BomoFB_comp10415_c3_seq12
914bp
FPKM:0.93 TPM:1.02
2077 A_BomoFB_comp10415_c3_seq13
754bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0008150 P biological_process
FPKM:0.00 TPM:0.00
2078 A_BomoFB_comp10415_c3_seq14
1267bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
FPKM:9.22 TPM:10.10
2079 A_BomoFB_comp10415_c3_seq15
961bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
FPKM:0.07 TPM:0.08
2080 A_BomoFB_comp10415_c3_seq16
862bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0008150 P biological_process
FPKM:0.00 TPM:0.00
2081 A_BomoFB_comp10415_c3_seq17
624bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0008150 P biological_process
FPKM:0.00 TPM:0.00
2082 A_BomoFB_comp10415_c3_seq18
1528bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
FPKM:2.30 TPM:2.52
2083 A_BomoFB_comp10415_c3_seq19
584bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
FPKM:2.69 TPM:2.95
2084 A_BomoFB_comp10415_c3_seq2
207bp
 hypothetical_protein_KGM_21772_[Danaus_plexippus]
FPKM:1.55 TPM:1.70
2085 A_BomoFB_comp10415_c3_seq20
4061bp
 PREDICTED:_atlastin-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007029 P endoplasmic reticulum organization
GO:0007030 P Golgi organization
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0051260 P protein homooligomerization
FPKM:2.52 TPM:2.76
2086 A_BomoFB_comp10415_c3_seq21
3620bp
 PREDICTED:_atlastin-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007029 P endoplasmic reticulum organization
GO:0007030 P Golgi organization
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0051260 P protein homooligomerization
FPKM:33.92 TPM:37.17
2087 A_BomoFB_comp10415_c3_seq22
4280bp
 PREDICTED:_atlastin-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007029 P endoplasmic reticulum organization
GO:0007030 P Golgi organization
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0051260 P protein homooligomerization
FPKM:0.10 TPM:0.11
2088 A_BomoFB_comp10415_c3_seq23
1125bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0008150 P biological_process
FPKM:0.00 TPM:0.00
2089 A_BomoFB_comp10415_c3_seq24
1222bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
FPKM:0.00 TPM:0.00
2090 A_BomoFB_comp10415_c3_seq25
3839bp
 PREDICTED:_atlastin-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007029 P endoplasmic reticulum organization
GO:0007030 P Golgi organization
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0051260 P protein homooligomerization
FPKM:1.00 TPM:1.10
2091 A_BomoFB_comp10415_c3_seq3
445bp
 hypothetical_protein_KGM_21772_[Danaus_plexippus]
FPKM:6.21 TPM:6.81
2092 A_BomoFB_comp10415_c3_seq4
708bp
 hypothetical_protein_KGM_21772_[Danaus_plexippus]
FPKM:3.62 TPM:3.97
2093 A_BomoFB_comp10415_c3_seq5
296bp
 hypothetical_protein_KGM_21772_[Danaus_plexippus]
FPKM:1.42 TPM:1.56
2094 A_BomoFB_comp10415_c3_seq6
695bp
 PREDICTED:_target_of_rapamycin_complex_subunit_lst8_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0008150 P biological_process
FPKM:0.00 TPM:0.00
2095 A_BomoFB_comp10415_c3_seq7
614bp
 hypothetical_protein_KGM_21772_[Danaus_plexippus]
FPKM:5.29 TPM:5.80
2096 A_BomoFB_comp10415_c3_seq8
278bp
 hypothetical_protein_KGM_21772_[Danaus_plexippus]
FPKM:1.68 TPM:1.84
2097 A_BomoFB_comp10415_c3_seq9
379bp
FPKM:0.00 TPM:0.00
2098 A_BomoFB_comp10415_c4_seq1
499bp
 uncharacterized_protein_LOC100275141_precursor_[Zea_mays]
FPKM:1.37 TPM:1.51
2099 A_BomoFB_comp10416_c0_seq1
2058bp
 PREDICTED:_titin_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0015629 C actin cytoskeleton
FPKM:2.89 TPM:3.17
2100 A_BomoFB_comp10416_c0_seq10
7817bp
 PREDICTED:_titin_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0015629 C actin cytoskeleton
FPKM:1.48 TPM:1.62
previous next from show/35635

- SilkBase 1999-2023 -