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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
61 A_BomoEE_comp10021_c0_seq1
598bp
FPKM:0.25 TPM:0.43
62 A_BomoEE_comp1002299_c0_seq1
234bp
FPKM:0.12 TPM:0.21
63 A_BomoEE_comp10022_c0_seq1
527bp
FPKM:0.18 TPM:0.32
64 A_BomoEE_comp1002337_c0_seq1
371bp
 hypothetical_protein_PBRA_001437_[Plasmodiophora_brassicae]
FPKM:0.29 TPM:0.50
65 A_BomoEE_comp10023_c0_seq1
916bp
 endonuclease-reverse_transcriptase_[Danaus_plexippus]
FPKM:0.13 TPM:0.23
66 A_BomoEE_comp1002424_c0_seq1
261bp
FPKM:0.09 TPM:0.16
67 A_BomoEE_comp100247_c0_seq1
1261bp
 Phosphatidylinositol-glycan_biosynthesis_class_F_protein_[Operophtera_brumata]
GO:0004307 F ethanolaminephosphotransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016254 P preassembly of GPI anchor in ER membrane
FPKM:6.48 TPM:11.31
68 A_BomoEE_comp1002485_c0_seq1
214bp
 1-phosphatidylinositol_4,5-bisphosphate_phosphodiesterase_beta-4,_partial_[Trichinella_papuae]
FPKM:0.16 TPM:0.29
69 A_BomoEE_comp1002494_c0_seq1
258bp
FPKM:0.37 TPM:0.64
70 A_BomoEE_comp1002519_c0_seq1
345bp
FPKM:0.14 TPM:0.25
71 A_BomoEE_comp1002551_c0_seq1
262bp
 RIP_metalloprotease_RseP_[Nevskia_soli]
FPKM:0.44 TPM:0.77
72 A_BomoEE_comp10025_c0_seq1
745bp
FPKM:0.23 TPM:0.39
73 A_BomoEE_comp1002625_c0_seq1
236bp
FPKM:0.00 TPM:0.00
74 A_BomoEE_comp1002636_c0_seq1
246bp
FPKM:0.32 TPM:0.55
75 A_BomoEE_comp1002659_c0_seq1
397bp
FPKM:0.25 TPM:0.44
76 A_BomoEE_comp1002688_c0_seq1
306bp
 hypothetical_protein_GALMADRAFT_209807_[Galerina_marginata_CBS_339.88]
FPKM:0.36 TPM:0.64
77 A_BomoEE_comp100269_c0_seq1
744bp
FPKM:11.90 TPM:20.75
78 A_BomoEE_comp1002749_c0_seq1
549bp
FPKM:0.30 TPM:0.53
79 A_BomoEE_comp1002774_c0_seq1
493bp
 malonyl_CoA-acyl_carrier_protein_transacylase,_putative_[Aspergillus_clavatus_NRRL_1]
FPKM:0.25 TPM:0.44
80 A_BomoEE_comp1002783_c0_seq1
494bp
hypothetical_protein_HM1_3126_[Heliobacterium_modesticaldum_Ice1]
FPKM:0.28 TPM:0.48
81 A_BomoEE_comp1002814_c0_seq1
461bp
 hypothetical_protein_LY89DRAFT_717366_[Phialocephala_scopiformis]
FPKM:0.20 TPM:0.34
82 A_BomoEE_comp100282_c0_seq1
4275bp
 PREDICTED:_sortilin-related_receptor-like_isoform_X2_[Papilio_xuthus]
GO:0000042 P protein localization to Golgi apparatus
GO:0001540 F amyloid-beta binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005641 C nuclear envelope lumen
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006605 P protein targeting
GO:0006622 P protein targeting to lysosome
GO:0006629 P lipid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0014910 P regulation of smooth muscle cell migration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030169 F low-density lipoprotein particle binding
GO:0030306 F small GTPase binding
GO:0031985 C Golgi cisterna
GO:0032091 P negative regulation of protein binding
GO:0032460 P negative regulation of protein oligomerization
GO:0034362 C low-density lipoprotein particle
GO:0043407 P negative regulation of MAP kinase activity
GO:0045053 P protein retention in Golgi apparatus
GO:0045732 P positive regulation of protein catabolic process
GO:0048471 C perinuclear region of cytoplasm
GO:0050768 P negative regulation of neurogenesis
GO:0051604 P protein maturation
GO:0055037 C recycling endosome
GO:0070062 C extracellular exosome
GO:0070863 P positive regulation of protein exit from endoplasmic reticulum
GO:1901215 P negative regulation of neuron death
GO:1902430 P negative regulation of amyloid-beta formation
GO:1902771 P positive regulation of choline O-acetyltransferase activity
GO:1902948 P negative regulation of tau-protein kinase activity
GO:1902953 P positive regulation of ER to Golgi vesicle-mediated transport
GO:1902955 P positive regulation of early endosome to recycling endosome transport
GO:1902960 P negative regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process
GO:1902963 P negative regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process
GO:1902966 P positive regulation of protein localization to early endosome
GO:1902997 P negative regulation of neurofibrillary tangle assembly
GO:2001137 P positive regulation of endocytic recycling
FPKM:8.64 TPM:15.08
83 A_BomoEE_comp1002866_c0_seq1
323bp
FPKM:0.11 TPM:0.19
84 A_BomoEE_comp10028_c0_seq1
735bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X4_[Papilio_machaon]
FPKM:0.32 TPM:0.55
85 A_BomoEE_comp1002921_c0_seq1
211bp
 hypothetical_protein_[Paenibacillus_pasadenensis]
FPKM:0.00 TPM:0.00
86 A_BomoEE_comp1002938_c0_seq1
287bp
FPKM:0.21 TPM:0.37
87 A_BomoEE_comp1002951_c0_seq1
1087bp
FPKM:0.19 TPM:0.34
88 A_BomoEE_comp100295_c0_seq1
559bp
FPKM:13.29 TPM:23.18
89 A_BomoEE_comp1002962_c0_seq1
232bp
 hypothetical_protein_AYK25_09695_[Thermoplasmatales_archaeon_SM1-50]
FPKM:0.25 TPM:0.44
90 A_BomoEE_comp1002975_c0_seq1
493bp
FPKM:0.10 TPM:0.18
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